Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, strip_cross_object_altlabels group_key=radon||dimension=Resource > media=Air; cas=10043-92-2; added Common Chemistry CAS names as altLabel: MeSH ID: D011886; object_uuid=fo-37b91965500c706c
prefLabel 3 bootstrap_labels, flow_layers.pubchem_element_enrichment, normalize_name_case element name from the flow object: Radon
cas_match_labels 1 consensus_match group_key=radon||dimension=Resource > media=Air; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'10043-92-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-37b91965500c706c: {'10043-92-2': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Resources > Resources from air > Renewable element resources from air
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Resources > Resources from air > Renewable element resources from air
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 233-146-0 from CAS 10043-92-2
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['10043-92-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33314', 'http://purl.obolibrary.org/obo/CHEBI_49997']; candidate_pubchem_cids=[24857]; selected_pubchem_cids=[24857]; formula_similarity_expected=['Rn']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

23
# Step Field From To Why
11,680 bootstrap_labels prefLabel [{"@value":"radon","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consensu… Bootstrapped prefLabel from legacy name field
11,681 bootstrap_labels name radon Purged legacy name field to enforce prefLabel usage
11,682 bootstrap_labels synonyms ["(219rn)radon","(224rn)radon","(226rn)radon","86Rn","AC1L2NQ4","Alphatron","KST-1A1577","KST-1A1903","KST-1A3987","Nit… [] Removed legacy synonyms field in favor of structured labels
45,294 default_context_mapping context {"dimension":"Resource","media":"Air"} Mapped from context mapping for source=EF 3.1, source context Resources > Resources from air > Renewable element resources from air
45,295 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/reso-air Mapped from context mapping for source=EF 3.1, source context Resources > Resources from air > Renewable element resources from air
217,218 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,807 normalize_name_case prefLabel [{"@value":"radon","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consensu… [{"@value":"Radon","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consensu… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
226,954 ec_cross_check ec_numbers [] ["233-146-0"] Resolved from EC-inventory: 233-146-0 from CAS 10043-92-2
238,307 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Rn"],"atte… Added ChEBI/PubChem properties (chebi_ids=2, pubchem_cids=1)
238,308 enrich_references skos_definition [{"@value":"A monoatomic radon that has an oxidation state of zero.","@language":"en","provenance":{"prov:wasGeneratedB… Merged ChEBI/PubChem definitions into skos:definition
238,309 enrich_references references [] [{"@id":"gmelin:16242","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… Added references with provenance; cas_numbers=['10043-92-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33314', 'http://purl.obolibrary.org/obo/CHEBI_49997']; candidate_pubchem_cids=[24857]; selected_pubchem_cids=[24857]; formula_similarity_expected=['Rn']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
251,520 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Rn"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Rn"],"atte… rdkit_pre_consensus from '[Rn]'; added: monoisotopic_mass
256,011 chebi_altlabels altLabel [] [{"@value":"86Rn","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Added 8 ChEBI synonym(s) as altLabel from 2 linked ChEBI record(s)
257,457 strip_cross_object_altlabels altLabel [{"@value":"86Rn","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"86Rn","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Removed 1 altLabel value(s) that duplicate another flow object's prefLabel: 'Radon-222'
271,304 consensus_match altLabel [{"@value":"86Rn","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"86Rn","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… group_key=radon||dimension=Resource > media=Air; cas=10043-92-2; added Common Chemistry CAS names as altLabel: MeSH ID: D011886; object_uuid=fo-37b91965500c706c
271,305 consensus_match cas_match_labels {"10043-92-2":"exactMatch"} group_key=radon||dimension=Resource > media=Air; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'10043-92-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-37b91965500c706c: {'10043-92-2': 'exactMatch'}
276,717 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Rn"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Rn"],"atte… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Radon'
283,344 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Rn"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Rn"],"atte… rdkit_post_consensus from '[Rn]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
303,693 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/0d7a620d-6556-… associations resolved on the elementary layer
391,073 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Rn"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Rn"],"atte… typed the way the ontology types it
398,943 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalElement"] the substance's answer, copied onto its flow
398,944 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Rn"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Rn"],"atte… the substance's answer, copied onto its flow
403,827 flow_layers.pubchem_element_enrichment prefLabel [{"@value":"Radon","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consensu… [{"@value":"Radon","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_enrichmen… element name from the flow object: Radon

PROV-O trail

23 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/11680 prefLabel ef:agent/bootstrap_labels ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v0 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v1
ef:activity/change/20260820T0738569779880000/11681 name ef:agent/bootstrap_labels ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v1 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v2
ef:activity/change/20260820T0738569779880000/11682 synonyms ef:agent/bootstrap_labels ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v2 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v3
ef:activity/change/20260820T0738569779880000/45294 context ef:agent/default_context_mapping ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v3 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v4
ef:activity/change/20260820T0738569779880000/45295 context_iri ef:agent/default_context_mapping ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v4 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v5
ef:activity/change/20260820T0738569779880000/217218 unit_iri ef:agent/unit_normalization ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v5 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v6
ef:activity/change/20260820T0738569779880000/223807 prefLabel ef:agent/normalize_name_case ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v6 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v7
ef:activity/change/20260820T0738569779880000/226954 ec_numbers ef:agent/ec_cross_check ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v7 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v8
ef:activity/change/20260820T0738569779880000/238307 properties ef:agent/enrich_references ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v8 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v9
ef:activity/change/20260820T0738569779880000/238308 skos_definition ef:agent/enrich_references ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v9 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v10
ef:activity/change/20260820T0738569779880000/238309 references ef:agent/enrich_references ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v10 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v11
ef:activity/change/20260820T0738569779880000/251520 properties ef:agent/rdkit_pre_consensus ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v11 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v12
ef:activity/change/20260820T0738569779880000/256011 altLabel ef:agent/chebi_altlabels ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v12 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v13
ef:activity/change/20260820T0738569779880000/257457 altLabel ef:agent/strip_cross_object_altlabels ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v13 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v14
ef:activity/change/20260820T0738569779880000/271304 altLabel ef:agent/consensus_match ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v14 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v15
ef:activity/change/20260820T0738569779880000/271305 cas_match_labels ef:agent/consensus_match ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v15 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v16
ef:activity/change/20260820T0738569779880000/276717 properties ef:agent/opsin_iupac ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v16 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v17
ef:activity/change/20260820T0738569779880000/283344 properties ef:agent/rdkit_post_consensus ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v17 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v18
ef:activity/change/20260820T0738569779880000/303693 concept_associations ef:agent/carry_associations_onto_flows ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v18 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v19
ef:activity/change/20260820T0738569779880000/391073 properties ef:agent/normalise_property_values ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v19 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v20
ef:activity/change/20260820T0738569779880000/398943 types ef:agent/link_flows_to_their_substance ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v20 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v21
ef:activity/change/20260820T0738569779880000/398944 properties ef:agent/link_flows_to_their_substance ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v21 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v22
ef:activity/change/20260820T0738569779880000/403827 prefLabel ef:agent/flow_layers.pubchem_element_enrichment ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v22 ef:flow/0d7a620d-6556-11dd-ad8b-0800200c9a66/v23

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