Ryanodine
Everything that changed this flow. Back to the flow
1051b021-c615-45ea-b459-8097c90dfa98
By field
15 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, link_flows_to_their_substance, normalise_property_values, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 4 | chebi_altlabels, consensus_match, dedupe_altlabels | Deduplicated altLabel values and removed entries matching prefLabel |
| prefLabel | 3 | bootstrap_labels, consensus_match, normalize_name_case | cas=15662-33-6; cc_chebi_agreed_name='Ryanodine'; object_uuid=fo-0866d0bd2573d56d |
| cas_match_labels | 1 | consensus_match | group_key=6-(1α,5aβ,8aβ,9-pentahydroxy-7β-isopropyl-2β,5β,8β-trimethylperhydro-8bα,9-epoxy-5,8-ethanocyclopenta[1,2-b]indenyl)pyrrole-2-carboxylate||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory']; cas_sources={'15662-33-6': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-0866d0bd2573d56d: {'15662-33-6': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| ec_numbers | 1 | ec_cross_check | Resolved from EC-inventory: 239-732-2 from CAS 15662-33-6 |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['15662-33-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_8925']; candidate_pubchem_cids=[5114, 441753, 6326656, 11317883, 92132718, 122173044, 134694876, 139036175, 168012115, 171157346, 171378366]; selected_pubchem_cids=[11317883]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
24| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 5,771 | bootstrap_labels | prefLabel | — | [{"@value":"6-(1α,5aβ,8aβ,9-pentahydroxy-7β-isopropyl-2β,5β,8β-trimethylperhydro-8bα,9-epoxy-5,8-ethanocyclopenta[1,2-b… | Bootstrapped prefLabel from legacy name field |
| 5,772 | bootstrap_labels | name | 6-(1α,5aβ,8aβ,9-pentahydroxy-7β-isopropyl-2β,5β,8β-trimethylperhydro-8bα,9-epoxy-5,8-ethanocyclopenta[1,2-b]indenyl) py… | — | Purged legacy name field to enforce prefLabel usage |
| 5,773 | bootstrap_labels | synonyms | ["1H-Pyrrole-2-carboxylic acid, (3S,4R,4aR,6S,6aS,7S,8R,8aS,8bR,9S,9aS)-dodecahydro-4,6,7,8a,8b,9a-hexahydroxy-3,6a,9-t… | [] | Removed legacy synonyms field in favor of structured labels |
| 46,977 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| 46,978 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| 215,269 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 222,430 | normalize_name_case | prefLabel | [{"@value":"6-(1α,5aβ,8aβ,9-pentahydroxy-7β-isopropyl-2β,5β,8β-trimethylperhydro-8bα,9-epoxy-5,8-ethanocyclopenta[1,2-b… | [{"@value":"6-(1α,5aβ,8aβ,9-pentahydroxy-7β-isopropyl-2β,5β,8β-trimethylperhydro-8bα,9-epoxy-5,8-ethanocyclopenta[1,2-b… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 226,777 | ec_cross_check | ec_numbers | [] | ["239-732-2"] | Resolved from EC-inventory: 239-732-2 from CAS 15662-33-6 |
| 232,737 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H35NO9"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 232,738 | enrich_references | skos_definition | — | [{"@value":"An insecticide alkaloid isolated from South American plant Ryania speciosa.","@language":"en","provenance":… | Merged ChEBI/PubChem definitions into skos:definition |
| 232,739 | enrich_references | references | [] | [{"@id":"beilstein:6079034","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… | Added references with provenance; cas_numbers=['15662-33-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_8925']; candidate_pubchem_cids=[5114, 441753, 6326656, 11317883, 92132718, 122173044, 134694876, 139036175, 168012115, 171157346, 171378366]; selected_pubchem_cids=[11317883]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 249,922 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H35NO9"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H35NO9"… | rdkit_pre_consensus from 'CC1CCC2(C3(CC4(C5(C(C(C3(C5(C2(C1O)O4)O)O)OC(=O)C6=CC=CN6)(C(C)C)O)C)O)C)O'; added: inchi2d_string, monoisotopic_mass |
| 255,113 | chebi_altlabels | altLabel | [] | [{"@value":"(+)-ryanodine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"b… | Added 10 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 263,213 | consensus_match | prefLabel | [{"@value":"6-(1α,5aβ,8aβ,9-pentahydroxy-7β-isopropyl-2β,5β,8β-trimethylperhydro-8bα,9-epoxy-5,8-ethanocyclopenta[1,2-b… | [{"@value":"Ryanodine","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"brigh… | cas=15662-33-6; cc_chebi_agreed_name='Ryanodine'; object_uuid=fo-0866d0bd2573d56d |
| 263,214 | consensus_match | altLabel | [{"@value":"(+)-ryanodine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"b… | [{"@value":"(+)-ryanodine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"b… | cas=15662-33-6; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-0866d0bd2573d56d |
| 263,215 | consensus_match | altLabel | [{"@value":"(+)-ryanodine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"b… | [{"@value":"(+)-ryanodine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"b… | group_key=6-(1α,5aβ,8aβ,9-pentahydroxy-7β-isopropyl-2β,5β,8β-trimethylperhydro-8bα,9-epoxy-5,8-ethanocyclopenta[1,2-b]indenyl)pyrrole-2-carboxylate||dimension=Environmental > media=Water > water_body=Ocean; cas=15662-33-6; added Common Chemistry CAS names as altLabel: 1<em>H</em>-Pyrrole-2-carboxylic acid, (3<em>S</em>,4<em>R</em>,4a<em>R</em>,6<em>S</em>,6a<em>S</em>,7<em>S</em>,8<em>R</em>,8a<em>S</em>,8b<em>R</em>,9<em>S</em>,9a<em>S</em>)-dodecahydro-4,6,7,8a,8b,9a-hexahydroxy-3,6a,9-trimethyl-7-(1-methylethyl)-6,9-methanobenzo[1,2]pentaleno[1,6-<em>bc</em>]furan-8-yl ester, 1<em>H</em>-Pyrrole-2-carboxylic acid, dodecahydro-4,6,7,8a,8b,9a-hexahydroxy-3,6a,9-trimethyl-7-(1-methylethyl)-6,9-methanobenzo[1,2]pentaleno[1,6-<em>bc</em>]furan-8-yl ester, [3<em>S</em>-(3α,4β,4a<em>S</em>*,6α,6aα,7α,8β,8aα,8bβ,9β,9aα)]-, MeSH ID: D012433, Ryania (pesticide); object_uuid=fo-0866d0bd2573d56d |
| 263,216 | consensus_match | cas_match_labels | — | {"15662-33-6":"exactMatch"} | group_key=6-(1α,5aβ,8aβ,9-pentahydroxy-7β-isopropyl-2β,5β,8β-trimethylperhydro-8bα,9-epoxy-5,8-ethanocyclopenta[1,2-b]indenyl)pyrrole-2-carboxylate||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory']; cas_sources={'15662-33-6': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-0866d0bd2573d56d: {'15662-33-6': 'exactMatch'} |
| 281,550 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H35NO9"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H35NO9"… | rdkit_post_consensus from 'CC1CCC2(C3(CC4(C5(C(C(C3(C5(C2(C1O)O4)O)O)OC(=O)C6=CC=CN6)(C(C)C)O)C)O)C)O'; confirmed: smiles_string, inchi2d_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 292,303 | dedupe_altlabels | altLabel | [{"@value":"(+)-ryanodine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"b… | [{"@value":"(+)-ryanodine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"b… | Deduplicated altLabel values and removed entries matching prefLabel |
| 304,556 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/1051b021-c615-… | associations resolved on the elementary layer |
| 389,392 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H35NO9"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H35NO9"… | typed the way the ontology types it |
| 396,501 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 396,502 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24852","rdfs:label":"insecticide","http://www.w3.org/2004/02/skos/core#de… | the substance's answer, copied onto its flow |
| 396,503 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H35NO9"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H35NO9"… | the substance's answer, copied onto its flow |
PROV-O trail
24 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20261019T0712047113160000/5771 | prefLabel | ef:agent/bootstrap_labels | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v0 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v1 |
| ef:activity/change/20261019T0712047113160000/5772 | name | ef:agent/bootstrap_labels | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v1 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v2 |
| ef:activity/change/20261019T0712047113160000/5773 | synonyms | ef:agent/bootstrap_labels | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v2 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v3 |
| ef:activity/change/20261019T0712047113160000/46977 | context | ef:agent/default_context_mapping | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v3 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v4 |
| ef:activity/change/20261019T0712047113160000/46978 | context_iri | ef:agent/default_context_mapping | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v4 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v5 |
| ef:activity/change/20261019T0712047113160000/215269 | unit_iri | ef:agent/unit_normalization | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v5 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v6 |
| ef:activity/change/20261019T0712047113160000/222430 | prefLabel | ef:agent/normalize_name_case | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v6 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v7 |
| ef:activity/change/20261019T0712047113160000/226777 | ec_numbers | ef:agent/ec_cross_check | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v7 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v8 |
| ef:activity/change/20261019T0712047113160000/232737 | properties | ef:agent/enrich_references | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v8 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v9 |
| ef:activity/change/20261019T0712047113160000/232738 | skos_definition | ef:agent/enrich_references | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v9 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v10 |
| ef:activity/change/20261019T0712047113160000/232739 | references | ef:agent/enrich_references | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v10 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v11 |
| ef:activity/change/20261019T0712047113160000/249922 | properties | ef:agent/rdkit_pre_consensus | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v11 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v12 |
| ef:activity/change/20261019T0712047113160000/255113 | altLabel | ef:agent/chebi_altlabels | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v12 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v13 |
| ef:activity/change/20261019T0712047113160000/263213 | prefLabel | ef:agent/consensus_match | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v13 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v14 |
| ef:activity/change/20261019T0712047113160000/263214 | altLabel | ef:agent/consensus_match | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v14 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v15 |
| ef:activity/change/20261019T0712047113160000/263215 | altLabel | ef:agent/consensus_match | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v15 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v16 |
| ef:activity/change/20261019T0712047113160000/263216 | cas_match_labels | ef:agent/consensus_match | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v16 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v17 |
| ef:activity/change/20261019T0712047113160000/281550 | properties | ef:agent/rdkit_post_consensus | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v17 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v18 |
| ef:activity/change/20261019T0712047113160000/292303 | altLabel | ef:agent/dedupe_altlabels | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v18 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v19 |
| ef:activity/change/20261019T0712047113160000/304556 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v19 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v20 |
| ef:activity/change/20261019T0712047113160000/389392 | properties | ef:agent/normalise_property_values | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v20 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v21 |
| ef:activity/change/20261019T0712047113160000/396501 | types | ef:agent/link_flows_to_their_substance | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v21 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v22 |
| ef:activity/change/20261019T0712047113160000/396502 | roles | ef:agent/link_flows_to_their_substance | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v22 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v23 |
| ef:activity/change/20261019T0712047113160000/396503 | properties | ef:agent/link_flows_to_their_substance | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v23 | ef:flow/1051b021-c615-45ea-b459-8097c90dfa98/v24 |