Pentan-1-ol
Everything that changed this flow. Back to the flow
11851a5e-7169-4d44-8a0e-886796fc9b57
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 5707' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=pentan-1-ol||dimension=Environmental > media=Water > water_body=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'71-41-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-74299d4a5f357e74: {'71-41-0': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['71-41-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_44884']; candidate_pubchem_cids=[6276, 19704732]; selected_pubchem_cids=[6276]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 5,046 | bootstrap_labels | prefLabel | — | [{"@value":"pentan-1-ol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… | Bootstrapped prefLabel from legacy name field |
| 5,047 | bootstrap_labels | name | pentan-1-ol | — | Purged legacy name field to enforce prefLabel usage |
| 5,048 | bootstrap_labels | synonyms | ["1-Pentanol","1-Pentyl alcohol","AC1L1M6C","AC1Q2WLD","Alcool amylique","Amyl alcohol","Amyl alcohol, n-","Amyl alcoho… | [] | Removed legacy synonyms field in favor of structured labels |
| 47,674 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| 47,675 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| 215,025 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 222,257 | normalize_name_case | prefLabel | [{"@value":"pentan-1-ol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… | [{"@value":"Pentan-1-ol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 232,031 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O"],"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 232,032 | enrich_references | skos_definition | — | [{"@value":"A short-chain primary fatty alcohol that is pentane in which a hydrogen of one of the methyl groups is subs… | Merged ChEBI/PubChem definitions into skos:definition |
| 232,033 | enrich_references | references | [] | [{"@id":"agr:IND608009856","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… | Added references with provenance; cas_numbers=['71-41-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_44884']; candidate_pubchem_cids=[6276, 19704732]; selected_pubchem_cids=[6276]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 249,710 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O"],"… | rdkit_pre_consensus from 'CCCCCO'; added: monoisotopic_mass |
| 255,020 | chebi_altlabels | altLabel | [] | [{"@value":"1-pentanol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… | Added 18 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 270,451 | consensus_match | altLabel | [{"@value":"1-pentanol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… | [{"@value":"1-pentanol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… | group_key=pentan-1-ol||dimension=Environmental > media=Water > water_body=Long-term; cas=71-41-0; added Common Chemistry CAS names as altLabel: <em>n</em>-Butyl carbinol, <em>n</em>-Pentanol, Amyl alcohol, Butyl carbinol, NSC 5707, Pentanol; object_uuid=fo-74299d4a5f357e74 |
| 270,452 | consensus_match | cas_match_labels | — | {"71-41-0":"exactMatch"} | group_key=pentan-1-ol||dimension=Environmental > media=Water > water_body=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'71-41-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-74299d4a5f357e74: {'71-41-0': 'exactMatch'} |
| 274,847 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O"],"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Pentan-1-ol' |
| 281,318 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O"],"… | rdkit_post_consensus from 'CCCCCO'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 288,293 | strip_catalogue_altlabels | altLabel | [{"@value":"1-pentanol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… | [{"@value":"1-pentanol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… | Removed 1 catalogue altLabel value(s): 'NSC 5707' (registry code) |
| 304,865 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/11851a5e-7169-… | associations resolved on the elementary layer |
| 389,152 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O"],"… | typed the way the ontology types it |
| 396,187 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260822T0600486828500000/5046 | prefLabel | ef:agent/bootstrap_labels | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v0 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v1 |
| ef:activity/change/20260822T0600486828500000/5047 | name | ef:agent/bootstrap_labels | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v1 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v2 |
| ef:activity/change/20260822T0600486828500000/5048 | synonyms | ef:agent/bootstrap_labels | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v2 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v3 |
| ef:activity/change/20260822T0600486828500000/47674 | context | ef:agent/default_context_mapping | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v3 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v4 |
| ef:activity/change/20260822T0600486828500000/47675 | context_iri | ef:agent/default_context_mapping | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v4 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v5 |
| ef:activity/change/20260822T0600486828500000/215025 | unit_iri | ef:agent/unit_normalization | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v5 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v6 |
| ef:activity/change/20260822T0600486828500000/222257 | prefLabel | ef:agent/normalize_name_case | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v6 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v7 |
| ef:activity/change/20260822T0600486828500000/232031 | properties | ef:agent/enrich_references | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v7 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v8 |
| ef:activity/change/20260822T0600486828500000/232032 | skos_definition | ef:agent/enrich_references | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v8 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v9 |
| ef:activity/change/20260822T0600486828500000/232033 | references | ef:agent/enrich_references | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v9 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v10 |
| ef:activity/change/20260822T0600486828500000/249710 | properties | ef:agent/rdkit_pre_consensus | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v10 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v11 |
| ef:activity/change/20260822T0600486828500000/255020 | altLabel | ef:agent/chebi_altlabels | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v11 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v12 |
| ef:activity/change/20260822T0600486828500000/270451 | altLabel | ef:agent/consensus_match | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v12 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v13 |
| ef:activity/change/20260822T0600486828500000/270452 | cas_match_labels | ef:agent/consensus_match | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v13 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v14 |
| ef:activity/change/20260822T0600486828500000/274847 | properties | ef:agent/opsin_iupac | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v14 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v15 |
| ef:activity/change/20260822T0600486828500000/281318 | properties | ef:agent/rdkit_post_consensus | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v15 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v16 |
| ef:activity/change/20260822T0600486828500000/288293 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v16 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v17 |
| ef:activity/change/20260822T0600486828500000/304865 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v17 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v18 |
| ef:activity/change/20260822T0600486828500000/389152 | properties | ef:agent/normalise_property_values | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v18 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v19 |
| ef:activity/change/20260822T0600486828500000/396187 | types | ef:agent/link_flows_to_their_substance | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v19 | ef:flow/11851a5e-7169-4d44-8a0e-886796fc9b57/v20 |