Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'NSC 175998' (registry code), 'NSC 183' (registry code)
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=96-97-9; cc_chebi_agreed_name='5-Nitrosalicylic acid'; object_uuid=fo-40c87ea61cc056fa
cas_match_labels 1 consensus_match group_key=2-hydroxy-5-nitrobenzoicacid||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'96-97-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-40c87ea61cc056fa: {'96-97-9': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['96-97-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_61281']; candidate_pubchem_cids=[7318, 99348, 6992157, 19627166]; selected_pubchem_cids=[7318]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
9,912 bootstrap_labels prefLabel [{"@value":"2-hydroxy-5-nitrobenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wa… Bootstrapped prefLabel from legacy name field
9,913 bootstrap_labels name 2-hydroxy-5-nitrobenzoic acid Purged legacy name field to enforce prefLabel usage
9,914 bootstrap_labels synonyms ["organic","5-nitrosalicylicacid"] [] Removed legacy synonyms field in favor of structured labels
47,704 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
47,705 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
216,632 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,411 normalize_name_case prefLabel [{"@value":"2-hydroxy-5-nitrobenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wa… [{"@value":"2-hydroxy-5-nitrobenzoic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wa… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
236,646 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H5NO5"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
236,647 enrich_references skos_definition [{"@value":"A monohydroxybenzoic acid in which the hydroxy group is ortho- to the carboxylic acid group and which has a… Merged ChEBI/PubChem definitions into skos:definition
236,648 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J26.976J","provenance":{"prov:wasGeneratedBy":"enrich_referenc… Added references with provenance; cas_numbers=['96-97-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_61281']; candidate_pubchem_cids=[7318, 99348, 6992157, 19627166]; selected_pubchem_cids=[7318]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
251,039 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H5NO5"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H5NO5"],… rdkit_pre_consensus from 'C1=CC(=C(C=C1[N+](=O)[O-])C(=O)O)O'; added: monoisotopic_mass
255,796 chebi_altlabels altLabel [] [{"@value":"5-nitro-2-hydroxybenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… Added 2 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
260,919 consensus_match prefLabel [{"@value":"2-hydroxy-5-nitrobenzoic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wa… [{"@value":"5-Nitrosalicylic acid","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttribut… cas=96-97-9; cc_chebi_agreed_name='5-Nitrosalicylic acid'; object_uuid=fo-40c87ea61cc056fa
260,920 consensus_match altLabel [{"@value":"5-nitro-2-hydroxybenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… [{"@value":"5-nitro-2-hydroxybenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… cas=96-97-9; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-40c87ea61cc056fa
260,921 consensus_match altLabel [{"@value":"5-nitro-2-hydroxybenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… [{"@value":"5-nitro-2-hydroxybenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… group_key=2-hydroxy-5-nitrobenzoicacid||dimension=Environmental > media=Air > strata=Unknown; cas=96-97-9; added Common Chemistry CAS names as altLabel: Benzoic acid, 2-hydroxy-5-nitro-, NSC 175998, NSC 183, Salicylic acid, 5-nitro-; object_uuid=fo-40c87ea61cc056fa
260,922 consensus_match cas_match_labels {"96-97-9":"exactMatch"} group_key=2-hydroxy-5-nitrobenzoicacid||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'96-97-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-40c87ea61cc056fa: {'96-97-9': 'exactMatch'}
276,225 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H5NO5"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H5NO5"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '5-Nitrosalicylic acid'
282,810 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H5NO5"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H5NO5"],… rdkit_post_consensus from 'O=C(O)c1cc([N+](=O)[O-])ccc1O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,330 strip_catalogue_altlabels altLabel [{"@value":"5-nitro-2-hydroxybenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… [{"@value":"5-nitro-2-hydroxybenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… Removed 2 catalogue altLabel value(s): 'NSC 175998' (registry code), 'NSC 183' (registry code)
304,880 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/118c9520-fd74-… associations resolved on the elementary layer
390,571 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H5NO5"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H5NO5"],… typed the way the ontology types it
398,234 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/9912 prefLabel ef:agent/bootstrap_labels ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v0 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v1
ef:activity/change/20260821T1554374006150000/9913 name ef:agent/bootstrap_labels ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v1 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v2
ef:activity/change/20260821T1554374006150000/9914 synonyms ef:agent/bootstrap_labels ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v2 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v3
ef:activity/change/20260821T1554374006150000/47704 context ef:agent/default_context_mapping ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v3 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v4
ef:activity/change/20260821T1554374006150000/47705 context_iri ef:agent/default_context_mapping ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v4 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v5
ef:activity/change/20260821T1554374006150000/216632 unit_iri ef:agent/unit_normalization ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v5 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v6
ef:activity/change/20260821T1554374006150000/223411 prefLabel ef:agent/normalize_name_case ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v6 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v7
ef:activity/change/20260821T1554374006150000/236646 properties ef:agent/enrich_references ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v7 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v8
ef:activity/change/20260821T1554374006150000/236647 skos_definition ef:agent/enrich_references ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v8 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v9
ef:activity/change/20260821T1554374006150000/236648 references ef:agent/enrich_references ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v9 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v10
ef:activity/change/20260821T1554374006150000/251039 properties ef:agent/rdkit_pre_consensus ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v10 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v11
ef:activity/change/20260821T1554374006150000/255796 altLabel ef:agent/chebi_altlabels ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v11 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v12
ef:activity/change/20260821T1554374006150000/260919 prefLabel ef:agent/consensus_match ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v12 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v13
ef:activity/change/20260821T1554374006150000/260920 altLabel ef:agent/consensus_match ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v13 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v14
ef:activity/change/20260821T1554374006150000/260921 altLabel ef:agent/consensus_match ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v14 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v15
ef:activity/change/20260821T1554374006150000/260922 cas_match_labels ef:agent/consensus_match ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v15 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v16
ef:activity/change/20260821T1554374006150000/276225 properties ef:agent/opsin_iupac ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v16 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v17
ef:activity/change/20260821T1554374006150000/282810 properties ef:agent/rdkit_post_consensus ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v17 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v18
ef:activity/change/20260821T1554374006150000/289330 altLabel ef:agent/strip_catalogue_altlabels ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v18 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v19
ef:activity/change/20260821T1554374006150000/304880 concept_associations ef:agent/carry_associations_onto_flows ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v19 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v20
ef:activity/change/20260821T1554374006150000/390571 properties ef:agent/normalise_property_values ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v20 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v21
ef:activity/change/20260821T1554374006150000/398234 types ef:agent/link_flows_to_their_substance ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v21 ef:flow/118c9520-fd74-41f7-89f5-2bf71e2ad7d7/v22

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