Consensus flow list

By field

14 fields
Field Changes Written by Latest note
altLabel 4 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'M 9834' (grade code)
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=71626-11-4; cc_chebi_agreed_name='Benalaxyl'; object_uuid=fo-d46787b2380ec3af
properties 3 normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
cas_match_labels 1 consensus_match group_key=methyln-(2,6-dimethylphenyl)-n-(phenylacetyl)-dl-alaninate||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'71626-11-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-d46787b2380ec3af: {'71626-11-4': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['71626-11-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_3009']; candidate_pubchem_cids=[51369, 5491362]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
13,343 bootstrap_labels prefLabel [{"@value":"methyl n-(2,6-dimethylphenyl)-n-(phenylacetyl)-dl-alaninate","@language":"en","source":{"prov:wasGeneratedB… Bootstrapped prefLabel from legacy name field
13,344 bootstrap_labels name methyl n-(2,6-dimethylphenyl)-n-(phenylacetyl)-dl-alaninate Purged legacy name field to enforce prefLabel usage
13,345 bootstrap_labels synonyms ["organic","benalaxyl(iso)","methyln-(2,6-dimethylphenyl)-n-(phenylacetyl)-dl-alaninate"] [] Removed legacy synonyms field in favor of structured labels
47,716 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Ocean"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
47,717 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-ocea Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
217,754 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,193 normalize_name_case prefLabel [{"@value":"methyl n-(2,6-dimethylphenyl)-n-(phenylacetyl)-dl-alaninate","@language":"en","source":{"prov:wasGeneratedB… [{"@value":"Methyl N-(2,6-dimethylphenyl)-n-(phenylacetyl)-dl-alaninate","@language":"en","source":{"prov:wasGeneratedB… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
239,838 enrich_references skos_definition [{"@value":"A racemate comprising equal amounts of (R)- and (S)-benalaxyl.","@language":"en","provenance":{"prov:wasGen… Merged ChEBI/PubChem definitions into skos:definition
239,839 enrich_references references [] [{"@id":"https://commonchemistry.cas.org/detail?cas_rn=71626-11-4","provenance":{"prov:wasGeneratedBy":"enrich_referenc… Added references with provenance; cas_numbers=['71626-11-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_3009']; candidate_pubchem_cids=[51369, 5491362]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
256,210 chebi_altlabels altLabel [] [{"@value":"(+-)-benalaxyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
268,907 consensus_match prefLabel [{"@value":"Methyl N-(2,6-dimethylphenyl)-n-(phenylacetyl)-dl-alaninate","@language":"en","source":{"prov:wasGeneratedB… [{"@value":"Benalaxyl","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"conse… cas=71626-11-4; cc_chebi_agreed_name='Benalaxyl'; object_uuid=fo-d46787b2380ec3af
268,908 consensus_match altLabel [{"@value":"(+-)-benalaxyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… [{"@value":"(+-)-benalaxyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… cas=71626-11-4; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-d46787b2380ec3af
268,909 consensus_match altLabel [{"@value":"(+-)-benalaxyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… [{"@value":"(+-)-benalaxyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… group_key=methyln-(2,6-dimethylphenyl)-n-(phenylacetyl)-dl-alaninate||dimension=Environmental > media=Water > water_body=Ocean; cas=71626-11-4; added Common Chemistry CAS names as altLabel: (±)-Benalaxyl, <span class="text-smallcaps">D</smallcap><smallcap>L</span>-Alanine, <em>N</em>-(2,6-dimethylphenyl)-<em>N</em>-(phenylacetyl)-, methyl ester, Alanine, <em>N</em>-(2,6-dimethylphenyl)-<em>N</em>-(2-phenylacetyl)-, methyl ester, Alanine, <em>N</em>-(2,6-dimethylphenyl)-<em>N</em>-(phenylacetyl)-, methyl ester, Galben, Galben R 4-33 Blu; object_uuid=fo-d46787b2380ec3af
268,910 consensus_match cas_match_labels {"71626-11-4":"exactMatch"} group_key=methyln-(2,6-dimethylphenyl)-n-(phenylacetyl)-dl-alaninate||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'71626-11-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-d46787b2380ec3af: {'71626-11-4': 'exactMatch'}
277,174 opsin_iupac properties {} {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Methyl N-phenylacetyl-N-2,6-xylyl-DL-alaninate'
283,834 rdkit_post_consensus properties {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… rdkit_post_consensus from 'COC(=O)C(C)N(C(=O)Cc1ccccc1)c1c(C)cccc1C'; added: inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass; confirmed: smiles_string, inchi2d_string
290,019 strip_catalogue_altlabels altLabel [{"@value":"(+-)-benalaxyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… [{"@value":"(+-)-benalaxyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… Removed 1 catalogue altLabel value(s): 'M 9834' (grade code)
304,906 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/118eef34-bf38-… associations resolved on the elementary layer
391,525 normalise_property_values properties {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… typed the way the ontology types it
399,585 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
399,586 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24127","rdfs:label":"fungicide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/13343 prefLabel ef:agent/bootstrap_labels ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v0 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v1
ef:activity/change/20260820T0738569779880000/13344 name ef:agent/bootstrap_labels ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v1 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v2
ef:activity/change/20260820T0738569779880000/13345 synonyms ef:agent/bootstrap_labels ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v2 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v3
ef:activity/change/20260820T0738569779880000/47716 context ef:agent/default_context_mapping ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v3 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v4
ef:activity/change/20260820T0738569779880000/47717 context_iri ef:agent/default_context_mapping ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v4 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v5
ef:activity/change/20260820T0738569779880000/217754 unit_iri ef:agent/unit_normalization ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v5 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v6
ef:activity/change/20260820T0738569779880000/224193 prefLabel ef:agent/normalize_name_case ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v6 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v7
ef:activity/change/20260820T0738569779880000/239838 skos_definition ef:agent/enrich_references ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v7 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v8
ef:activity/change/20260820T0738569779880000/239839 references ef:agent/enrich_references ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v8 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v9
ef:activity/change/20260820T0738569779880000/256210 altLabel ef:agent/chebi_altlabels ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v9 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v10
ef:activity/change/20260820T0738569779880000/268907 prefLabel ef:agent/consensus_match ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v10 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v11
ef:activity/change/20260820T0738569779880000/268908 altLabel ef:agent/consensus_match ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v11 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v12
ef:activity/change/20260820T0738569779880000/268909 altLabel ef:agent/consensus_match ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v12 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v13
ef:activity/change/20260820T0738569779880000/268910 cas_match_labels ef:agent/consensus_match ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v13 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v14
ef:activity/change/20260820T0738569779880000/277174 properties ef:agent/opsin_iupac ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v14 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v15
ef:activity/change/20260820T0738569779880000/283834 properties ef:agent/rdkit_post_consensus ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v15 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v16
ef:activity/change/20260820T0738569779880000/290019 altLabel ef:agent/strip_catalogue_altlabels ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v16 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v17
ef:activity/change/20260820T0738569779880000/304906 concept_associations ef:agent/carry_associations_onto_flows ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v17 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v18
ef:activity/change/20260820T0738569779880000/391525 properties ef:agent/normalise_property_values ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v18 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v19
ef:activity/change/20260820T0738569779880000/399585 types ef:agent/link_flows_to_their_substance ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v19 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v20
ef:activity/change/20260820T0738569779880000/399586 roles ef:agent/link_flows_to_their_substance ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v20 ef:flow/118eef34-bf38-45c3-81e8-812ae03ca004/v21

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