Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=oxalonitrile||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'460-19-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-3ef99843fbce49f7: {'460-19-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['460-19-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_29308']; candidate_pubchem_cids=[9999]; selected_pubchem_cids=[9999]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
14,714 bootstrap_labels prefLabel [{"@value":"oxalonitrile","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… Bootstrapped prefLabel from legacy name field
14,715 bootstrap_labels name oxalonitrile Purged legacy name field to enforce prefLabel usage
14,716 bootstrap_labels synonyms ["inorganic","cyanogen","oxalonitrile","dikyan","dinitrilkyselinyå¡å¥avelovã©","edn","ethanedinitrile","oxalylcyanide"] [] Removed legacy synonyms field in favor of structured labels
49,812 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
49,813 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
218,191 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,489 normalize_name_case prefLabel [{"@value":"oxalonitrile","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… [{"@value":"Oxalonitrile","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
241,100 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2N2"],"at… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
241,101 enrich_references skos_definition [{"@value":"A dinitrile that is ethane substituted by two cyano groups.","@language":"en","provenance":{"prov:wasGenera… Merged ChEBI/PubChem definitions into skos:definition
241,102 enrich_references references [] [{"@id":"gmelin:1090","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… Added references with provenance; cas_numbers=['460-19-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_29308']; candidate_pubchem_cids=[9999]; selected_pubchem_cids=[9999]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,325 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2N2"],"at… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2N2"],"at… rdkit_pre_consensus from 'C(#N)C#N'; added: monoisotopic_mass
256,347 chebi_altlabels altLabel [] [{"@value":"(CN)2","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… Added 11 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
270,205 consensus_match altLabel [{"@value":"(CN)2","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… [{"@value":"(CN)2","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… group_key=oxalonitrile||dimension=Environmental > media=Air > strata=Unknown; cas=460-19-5; added Common Chemistry CAS names as altLabel: Carbon nitride (C<sub>2</sub>N<sub>2</sub>), Cyanogen (C<sub>2</sub>N<sub>2</sub>), EDN Fumigas, Nitriloacetonitrile, Oxalic acid dinitrile, Oxalyl cyanide; object_uuid=fo-3ef99843fbce49f7
270,206 consensus_match cas_match_labels {"460-19-5":"exactMatch"} group_key=oxalonitrile||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'460-19-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-3ef99843fbce49f7: {'460-19-5': 'exactMatch'}
277,518 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2N2"],"at… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2N2"],"at… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Oxalonitrile'
284,211 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2N2"],"at… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2N2"],"at… rdkit_post_consensus from 'N#CC#N'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,775 dedupe_altlabels altLabel [{"@value":"(CN)2","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… [{"@value":"(CN)2","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… Deduplicated altLabel values and removed entries matching prefLabel
305,933 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/15113217-108b-… associations resolved on the elementary layer
391,875 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2N2"],"at… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2N2"],"at… typed the way the ontology types it
400,103 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/14714 prefLabel ef:agent/bootstrap_labels ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v0 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v1
ef:activity/change/20260822T0600486828500000/14715 name ef:agent/bootstrap_labels ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v1 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v2
ef:activity/change/20260822T0600486828500000/14716 synonyms ef:agent/bootstrap_labels ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v2 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v3
ef:activity/change/20260822T0600486828500000/49812 context ef:agent/default_context_mapping ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v3 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v4
ef:activity/change/20260822T0600486828500000/49813 context_iri ef:agent/default_context_mapping ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v4 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v5
ef:activity/change/20260822T0600486828500000/218191 unit_iri ef:agent/unit_normalization ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v5 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v6
ef:activity/change/20260822T0600486828500000/224489 prefLabel ef:agent/normalize_name_case ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v6 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v7
ef:activity/change/20260822T0600486828500000/241100 properties ef:agent/enrich_references ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v7 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v8
ef:activity/change/20260822T0600486828500000/241101 skos_definition ef:agent/enrich_references ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v8 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v9
ef:activity/change/20260822T0600486828500000/241102 references ef:agent/enrich_references ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v9 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v10
ef:activity/change/20260822T0600486828500000/252325 properties ef:agent/rdkit_pre_consensus ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v10 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v11
ef:activity/change/20260822T0600486828500000/256347 altLabel ef:agent/chebi_altlabels ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v11 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v12
ef:activity/change/20260822T0600486828500000/270205 altLabel ef:agent/consensus_match ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v12 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v13
ef:activity/change/20260822T0600486828500000/270206 cas_match_labels ef:agent/consensus_match ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v13 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v14
ef:activity/change/20260822T0600486828500000/277518 properties ef:agent/opsin_iupac ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v14 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v15
ef:activity/change/20260822T0600486828500000/284211 properties ef:agent/rdkit_post_consensus ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v15 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v16
ef:activity/change/20260822T0600486828500000/292775 altLabel ef:agent/dedupe_altlabels ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v16 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v17
ef:activity/change/20260822T0600486828500000/305933 concept_associations ef:agent/carry_associations_onto_flows ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v17 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v18
ef:activity/change/20260822T0600486828500000/391875 properties ef:agent/normalise_property_values ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v18 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v19
ef:activity/change/20260822T0600486828500000/400103 types ef:agent/link_flows_to_their_substance ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v19 ef:flow/15113217-108b-4db1-ad3d-9b8eee11114e/v20

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