Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 7 catalogue altLabel value(s): 'FC 4112' (grade code), 'FC 87' (grade code), 'NVX 108' (grade code), 'NVX-108' (grade code), 'PF 5050' (grade code), 'QW 7437' (grade code), 'R 41(12)' (grade code)
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=678-26-2; cc_chebi_agreed_name='Perfluoropentane'; object_uuid=fo-437b79cb0b62b121
cas_match_labels 1 consensus_match group_key=dodecafluoropentane||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'678-26-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-437b79cb0b62b121: {'678-26-2': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 211-647-5 from CAS 678-26-2
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['678-26-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_39428']; candidate_pubchem_cids=[12675]; selected_pubchem_cids=[12675]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

23
# Step Field From To Why
15,460 bootstrap_labels prefLabel [{"@value":"dodecafluoropentane","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribute… Bootstrapped prefLabel from legacy name field
15,461 bootstrap_labels name dodecafluoropentane Purged legacy name field to enforce prefLabel usage
15,462 bootstrap_labels synonyms ["1,1,1,2,2,3,3,4,4,5,5,5-Dodecafluoropentane","AC1L203V","Flutec PP50","MOLI000988","PC6182","PERFLUOROPENTANE","Penta… [] Removed legacy synonyms field in favor of structured labels
51,604 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
51,605 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
218,426 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,648 normalize_name_case prefLabel [{"@value":"dodecafluoropentane","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribute… [{"@value":"Dodecafluoropentane","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribute… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
226,994 ec_cross_check ec_numbers [] ["211-647-5"] Resolved from EC-inventory: 211-647-5 from CAS 678-26-2
241,764 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5F12"],"a… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
241,765 enrich_references skos_definition [{"@value":"A fluorocarbon that is pentane in which all of the hydrogens have been replaced by fluorines.","@language":… Merged ChEBI/PubChem definitions into skos:definition
241,766 enrich_references references [] [{"@id":"beilstein:1712388","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['678-26-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_39428']; candidate_pubchem_cids=[12675]; selected_pubchem_cids=[12675]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,520 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5F12"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5F12"],"a… rdkit_pre_consensus from 'C(C(C(F)(F)F)(F)F)(C(C(F)(F)F)(F)F)(F)F'; added: monoisotopic_mass
256,435 chebi_altlabels altLabel [] [{"@value":"NVX-108","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
266,594 consensus_match prefLabel [{"@value":"Dodecafluoropentane","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribute… [{"@value":"Perfluoropentane","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo"… cas=678-26-2; cc_chebi_agreed_name='Perfluoropentane'; object_uuid=fo-437b79cb0b62b121
266,595 consensus_match altLabel [{"@value":"NVX-108","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"NVX-108","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… cas=678-26-2; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-437b79cb0b62b121
266,598 consensus_match altLabel [{"@value":"NVX-108","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"NVX-108","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… group_key=dodecafluoropentane||dimension=Environmental > media=Ground > geography=Agricultural; cas=678-26-2; added Common Chemistry CAS names as altLabel: 1,1,1,2,2,3,3,4,4,5,5,5-Dodecafluoropentane, FC 4112, FC 87, Fluorinert FC 87, Fluorinert PF 5050, Flutec PP 50, NVX 108, PF 5050, PFC 41-12, Pentane, 1,1,1,2,2,3,3,4,4,5,5,5-dodecafluoro-, Pentane, dodecafluoro-, QW 7437, R 41(12), R-4112; object_uuid=fo-437b79cb0b62b121
266,600 consensus_match cas_match_labels {"678-26-2":"exactMatch"} group_key=dodecafluoropentane||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'678-26-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-437b79cb0b62b121: {'678-26-2': 'exactMatch'}
277,722 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5F12"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5F12"],"a… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Perfluoropentane'
284,421 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5F12"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5F12"],"a… rdkit_post_consensus from 'FC(F)(F)C(F)(F)C(F)(F)C(F)(F)C(F)(F)F'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
290,407 strip_catalogue_altlabels altLabel [{"@value":"NVX-108","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"n-perfluoropentane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedT… Removed 7 catalogue altLabel value(s): 'FC 4112' (grade code), 'FC 87' (grade code), 'NVX 108' (grade code), 'NVX-108' (grade code), 'PF 5050' (grade code), 'QW 7437' (grade code), 'R 41(12)' (grade code)
306,829 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/172ab2d6-6556-… associations resolved on the elementary layer
392,076 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5F12"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5F12"],"a… typed the way the ontology types it
400,377 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

23 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/15460 prefLabel ef:agent/bootstrap_labels ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v0 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v1
ef:activity/change/20260822T0600486828500000/15461 name ef:agent/bootstrap_labels ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v1 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v2
ef:activity/change/20260822T0600486828500000/15462 synonyms ef:agent/bootstrap_labels ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v2 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v3
ef:activity/change/20260822T0600486828500000/51604 context ef:agent/default_context_mapping ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v3 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v4
ef:activity/change/20260822T0600486828500000/51605 context_iri ef:agent/default_context_mapping ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v4 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v5
ef:activity/change/20260822T0600486828500000/218426 unit_iri ef:agent/unit_normalization ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v5 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v6
ef:activity/change/20260822T0600486828500000/224648 prefLabel ef:agent/normalize_name_case ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v6 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v7
ef:activity/change/20260822T0600486828500000/226994 ec_numbers ef:agent/ec_cross_check ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v7 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v8
ef:activity/change/20260822T0600486828500000/241764 properties ef:agent/enrich_references ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v8 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v9
ef:activity/change/20260822T0600486828500000/241765 skos_definition ef:agent/enrich_references ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v9 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v10
ef:activity/change/20260822T0600486828500000/241766 references ef:agent/enrich_references ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v10 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v11
ef:activity/change/20260822T0600486828500000/252520 properties ef:agent/rdkit_pre_consensus ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v11 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v12
ef:activity/change/20260822T0600486828500000/256435 altLabel ef:agent/chebi_altlabels ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v12 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v13
ef:activity/change/20260822T0600486828500000/266594 prefLabel ef:agent/consensus_match ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v13 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v14
ef:activity/change/20260822T0600486828500000/266595 altLabel ef:agent/consensus_match ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v14 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v15
ef:activity/change/20260822T0600486828500000/266598 altLabel ef:agent/consensus_match ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v15 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v16
ef:activity/change/20260822T0600486828500000/266600 cas_match_labels ef:agent/consensus_match ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v16 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v17
ef:activity/change/20260822T0600486828500000/277722 properties ef:agent/opsin_iupac ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v17 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v18
ef:activity/change/20260822T0600486828500000/284421 properties ef:agent/rdkit_post_consensus ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v18 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v19
ef:activity/change/20260822T0600486828500000/290407 altLabel ef:agent/strip_catalogue_altlabels ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v19 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v20
ef:activity/change/20260822T0600486828500000/306829 concept_associations ef:agent/carry_associations_onto_flows ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v20 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v21
ef:activity/change/20260822T0600486828500000/392076 properties ef:agent/normalise_property_values ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v21 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v22
ef:activity/change/20260822T0600486828500000/400377 types ef:agent/link_flows_to_their_substance ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v22 ef:flow/172ab2d6-6556-11dd-ad8b-0800200c9a66/v23

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