2-chloropyridine
Everything that changed this flow. Back to the flow
18efc506-fa0a-40f9-978a-e2c41c8e9d5d
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 4649' (registry code) |
| cas_match_labels | 1 | consensus_match | group_key=2-chloropyridine||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'109-09-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-61637eff96dab7b3: {'109-09-1': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| prefLabel | 1 | bootstrap_labels | Bootstrapped prefLabel from legacy name field |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['109-09-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_39174']; candidate_pubchem_cids=[873, 7977]; selected_pubchem_cids=[7977]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
19| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 2,926 | bootstrap_labels | prefLabel | — | [{"@value":"2-chloropyridine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… | Bootstrapped prefLabel from legacy name field |
| 2,927 | bootstrap_labels | name | 2-chloropyridine | — | Purged legacy name field to enforce prefLabel usage |
| 2,928 | bootstrap_labels | synonyms | [".alpha.-Chloropyridine","AB1003193","AC1L1PZL","AC1Q3KG7","AC1Q3PYN","AKOS000119192","BB_SC-6726","Chloroazine","Pyri… | [] | Removed legacy synonyms field in favor of structured labels |
| 52,980 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Long-term"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| 52,981 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-lote | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| 214,315 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 229,991 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H4ClN"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 229,992 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 229,993 | enrich_references | references | [] | [{"@id":"beilstein:105788","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… | Added references with provenance; cas_numbers=['109-09-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_39174']; candidate_pubchem_cids=[873, 7977]; selected_pubchem_cids=[7977]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 249,128 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H4ClN"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H4ClN"],… | rdkit_pre_consensus from 'C1=CC=NC(=C1)Cl'; added: monoisotopic_mass |
| 254,710 | chebi_altlabels | altLabel | [] | [{"@value":"alpha-chloropyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… | Added 2 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 260,732 | consensus_match | altLabel | [{"@value":"alpha-chloropyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… | [{"@value":"alpha-chloropyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… | group_key=2-chloropyridine||dimension=Environmental > media=Air > strata=Unknown; cas=109-09-1; added Common Chemistry CAS names as altLabel: NSC 4649, Pyridine, 2-chloro-, α-Chloropyridine; object_uuid=fo-61637eff96dab7b3 |
| 260,733 | consensus_match | cas_match_labels | — | {"109-09-1":"exactMatch"} | group_key=2-chloropyridine||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'109-09-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-61637eff96dab7b3: {'109-09-1': 'exactMatch'} |
| 274,244 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H4ClN"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H4ClN"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2-chloropyridine' |
| 280,672 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H4ClN"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H4ClN"],… | rdkit_post_consensus from 'Clc1ccccn1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 287,829 | strip_catalogue_altlabels | altLabel | [{"@value":"alpha-chloropyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… | [{"@value":"alpha-chloropyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… | Removed 1 catalogue altLabel value(s): 'NSC 4649' (registry code) |
| 307,518 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/18efc506-fa0a-… | associations resolved on the elementary layer |
| 388,541 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H4ClN"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H4ClN"],… | typed the way the ontology types it |
| 395,318 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
19 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1302361922970000/2926 | prefLabel | ef:agent/bootstrap_labels | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v0 | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v1 |
| ef:activity/change/20260821T1302361922970000/2927 | name | ef:agent/bootstrap_labels | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v1 | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v2 |
| ef:activity/change/20260821T1302361922970000/2928 | synonyms | ef:agent/bootstrap_labels | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v2 | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v3 |
| ef:activity/change/20260821T1302361922970000/52980 | context | ef:agent/default_context_mapping | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v3 | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v4 |
| ef:activity/change/20260821T1302361922970000/52981 | context_iri | ef:agent/default_context_mapping | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v4 | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v5 |
| ef:activity/change/20260821T1302361922970000/214315 | unit_iri | ef:agent/unit_normalization | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v5 | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v6 |
| ef:activity/change/20260821T1302361922970000/229991 | properties | ef:agent/enrich_references | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v6 | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v7 |
| ef:activity/change/20260821T1302361922970000/229992 | skos_definition | ef:agent/enrich_references | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v7 | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v8 |
| ef:activity/change/20260821T1302361922970000/229993 | references | ef:agent/enrich_references | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v8 | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v9 |
| ef:activity/change/20260821T1302361922970000/249128 | properties | ef:agent/rdkit_pre_consensus | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v9 | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v10 |
| ef:activity/change/20260821T1302361922970000/254710 | altLabel | ef:agent/chebi_altlabels | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v10 | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v11 |
| ef:activity/change/20260821T1302361922970000/260732 | altLabel | ef:agent/consensus_match | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v11 | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v12 |
| ef:activity/change/20260821T1302361922970000/260733 | cas_match_labels | ef:agent/consensus_match | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v12 | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v13 |
| ef:activity/change/20260821T1302361922970000/274244 | properties | ef:agent/opsin_iupac | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v13 | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v14 |
| ef:activity/change/20260821T1302361922970000/280672 | properties | ef:agent/rdkit_post_consensus | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v14 | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v15 |
| ef:activity/change/20260821T1302361922970000/287829 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v15 | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v16 |
| ef:activity/change/20260821T1302361922970000/307518 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v16 | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v17 |
| ef:activity/change/20260821T1302361922970000/388541 | properties | ef:agent/normalise_property_values | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v17 | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v18 |
| ef:activity/change/20260821T1302361922970000/395318 | types | ef:agent/link_flows_to_their_substance | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v18 | ef:flow/18efc506-fa0a-40f9-978a-e2c41c8e9d5d/v19 |