Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 4 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 3 catalogue altLabel value(s): 'A 10474' (grade code), 'FEMA 2665' (grade code), 'NSC 62788' (registry code)
prefLabel 2 bootstrap_labels, consensus_match cas=2216-51-5; cc_chebi_agreed_name='(-)-Menthol'; object_uuid=fo-ca60949f8836c805
cas_match_labels 1 consensus_match group_key=l-menthol||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'2216-51-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ca60949f8836c805: {'2216-51-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['2216-51-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_15409']; candidate_pubchem_cids=[1254, 16666, 88975, 165675, 5319369, 6432468, 12285348, 23617692]; selected_pubchem_cids=[16666]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
16,154 bootstrap_labels prefLabel [{"@value":"L-menthol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Bootstrapped prefLabel from legacy name field
16,155 bootstrap_labels name L-menthol Purged legacy name field to enforce prefLabel usage
16,156 bootstrap_labels synonyms ["(","(+-)-(1R*,3R*,4S*)-Menthol","(-)-(1R,3R,4S)-Menthol","(-)-Menthyl alcohol","(-)-menthol","(-)-p-Menthan-3-ol","(-… [] Removed legacy synonyms field in favor of structured labels
53,178 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
53,179 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
218,649 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
242,388 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
242,389 enrich_references skos_definition [{"@value":"A p-menthan-3-ol which has (1R,2S,5R)-stereochemistry. It is the most common naturally occurring enantiomer… Merged ChEBI/PubChem definitions into skos:definition
242,390 enrich_references references [] [{"@id":"drugcentral:934","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"c… Added references with provenance; cas_numbers=['2216-51-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_15409']; candidate_pubchem_cids=[1254, 16666, 88975, 165675, 5319369, 6432468, 12285348, 23617692]; selected_pubchem_cids=[16666]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,709 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… rdkit_pre_consensus from 'CC(C)[C@@H]1CC[C@@H](C)C[C@H]1O'; added: monoisotopic_mass
256,533 chebi_altlabels altLabel [] [{"@value":"(-)-(1R,3R,4S)-menthol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… Added 10 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
268,310 consensus_match prefLabel [{"@value":"L-menthol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… [{"@value":"(-)-Menthol","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"con… cas=2216-51-5; cc_chebi_agreed_name='(-)-Menthol'; object_uuid=fo-ca60949f8836c805
268,311 consensus_match altLabel [{"@value":"(-)-(1R,3R,4S)-menthol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… [{"@value":"(-)-(1R,3R,4S)-menthol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… cas=2216-51-5; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-ca60949f8836c805
268,312 consensus_match altLabel [{"@value":"(-)-(1R,3R,4S)-menthol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… [{"@value":"(-)-(1R,3R,4S)-menthol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… group_key=l-menthol||dimension=Environmental > media=Water > water_body=Unknown; cas=2216-51-5; added Common Chemistry CAS names as altLabel: (-)-<em>trans</em>-<em>p</em>-Menthan-<em>cis</em>-3-ol, (-)-Menthyl alcohol, (1<em>R</em>)-(-)-Menthol, (1<em>R</em>,2<em>S</em>,5<em>R</em>)-(-)-Menthol, (1<em>R</em>,2<em>S</em>,5<em>R</em>)-2-Isopropyl-5-methylcyclohexan-1-ol, (1<em>R</em>,2<em>S</em>,5<em>R</em>)-2-Isopropyl-5-methylcyclohexanol, (1<em>R</em>,2<em>S</em>,5<em>R</em>)-5-Methyl-2-(1-methylethyl)cyclohexanol, (1R,2S,5R)-5-Methyl-2-(propan-2-yl)cyclohexanol, (<em>R</em>)-(-)-Menthol, 1<em>R</em>-Menthol, <em>l</em>-(-)-Menthol, A 10474, Cyclohexanol, 5-methyl-2-(1-methylethyl)-, (1<em>R</em>,2<em>S</em>,5<em>R</em>)-, Cyclohexanol, 5-methyl-2-(1-methylethyl)-, [1<em>R</em>-(1α,2β,5α)]-, FEMA 2665, Hakkano, L-Mentholum, Menthol, (1<em>R</em>,3<em>R</em>,4<em>S</em>)-(-)-, Minclea, NSC 62788; object_uuid=fo-ca60949f8836c805
268,313 consensus_match cas_match_labels {"2216-51-5":"exactMatch"} group_key=l-menthol||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'2216-51-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ca60949f8836c805: {'2216-51-5': 'exactMatch'}
277,929 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(-)-(1R,3R,4S)-menthol'
284,641 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… rdkit_post_consensus from 'CC(C)[C@@H]1CC[C@@H](C)C[C@H]1O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
290,556 strip_catalogue_altlabels altLabel [{"@value":"(-)-(1R,3R,4S)-menthol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… [{"@value":"(-)-(1R,3R,4S)-menthol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… Removed 3 catalogue altLabel value(s): 'A 10474' (grade code), 'FEMA 2665' (grade code), 'NSC 62788' (registry code)
307,636 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/193ef6a9-d91c-… associations resolved on the elementary layer
392,283 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… typed the way the ontology types it
400,660 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
400,661 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/16154 prefLabel ef:agent/bootstrap_labels ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v0 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v1
ef:activity/change/20260820T0738569779880000/16155 name ef:agent/bootstrap_labels ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v1 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v2
ef:activity/change/20260820T0738569779880000/16156 synonyms ef:agent/bootstrap_labels ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v2 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v3
ef:activity/change/20260820T0738569779880000/53178 context ef:agent/default_context_mapping ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v3 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v4
ef:activity/change/20260820T0738569779880000/53179 context_iri ef:agent/default_context_mapping ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v4 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v5
ef:activity/change/20260820T0738569779880000/218649 unit_iri ef:agent/unit_normalization ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v5 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v6
ef:activity/change/20260820T0738569779880000/242388 properties ef:agent/enrich_references ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v6 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v7
ef:activity/change/20260820T0738569779880000/242389 skos_definition ef:agent/enrich_references ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v7 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v8
ef:activity/change/20260820T0738569779880000/242390 references ef:agent/enrich_references ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v8 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v9
ef:activity/change/20260820T0738569779880000/252709 properties ef:agent/rdkit_pre_consensus ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v9 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v10
ef:activity/change/20260820T0738569779880000/256533 altLabel ef:agent/chebi_altlabels ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v10 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v11
ef:activity/change/20260820T0738569779880000/268310 prefLabel ef:agent/consensus_match ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v11 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v12
ef:activity/change/20260820T0738569779880000/268311 altLabel ef:agent/consensus_match ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v12 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v13
ef:activity/change/20260820T0738569779880000/268312 altLabel ef:agent/consensus_match ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v13 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v14
ef:activity/change/20260820T0738569779880000/268313 cas_match_labels ef:agent/consensus_match ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v14 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v15
ef:activity/change/20260820T0738569779880000/277929 properties ef:agent/opsin_iupac ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v15 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v16
ef:activity/change/20260820T0738569779880000/284641 properties ef:agent/rdkit_post_consensus ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v16 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v17
ef:activity/change/20260820T0738569779880000/290556 altLabel ef:agent/strip_catalogue_altlabels ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v17 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v18
ef:activity/change/20260820T0738569779880000/307636 concept_associations ef:agent/carry_associations_onto_flows ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v18 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v19
ef:activity/change/20260820T0738569779880000/392283 properties ef:agent/normalise_property_values ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v19 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v20
ef:activity/change/20260820T0738569779880000/400660 types ef:agent/link_flows_to_their_substance ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v20 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v21
ef:activity/change/20260820T0738569779880000/400661 properties ef:agent/link_flows_to_their_substance ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v21 ef:flow/193ef6a9-d91c-42f7-8e02-ae5ca27fe8d6/v22

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