2,5-xylenol
Everything that changed this flow. Back to the flow
1c8bc05f-3344-461c-9cf1-e17cb0c0e601
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'FEMA 3595' (grade code), 'NSC 2599' (registry code) |
| cas_match_labels | 1 | consensus_match | group_key=2,5-xylenol||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'95-87-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-cc6a8700314615be: {'95-87-4': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| prefLabel | 1 | bootstrap_labels | Bootstrapped prefLabel from legacy name field |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['95-87-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_191381']; candidate_pubchem_cids=[7267, 161803, 21886837]; selected_pubchem_cids=[7267]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
19| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 9,877 | bootstrap_labels | prefLabel | — | [{"@value":"2,5-xylenol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… | Bootstrapped prefLabel from legacy name field |
| 9,878 | bootstrap_labels | name | 2,5-xylenol | — | Purged legacy name field to enforce prefLabel usage |
| 12,815 | bootstrap_labels | synonyms | ["1,2,5-Xylenol","1,4-Dimethyl-2-hydroxybenzene","1-Hydroxy-2,5-dimethylbenzene","2,5-DIMETHYLPHENOL","2,5-Dimethyl phe… | [] | Removed legacy synonyms field in favor of structured labels |
| 55,194 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Long-term"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 55,195 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-lote | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 216,621 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 236,614 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H10O"],"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 236,615 | enrich_references | skos_definition | — | [{"@value":"A member of the class of phenols that phenol substituted by methyl groups at positions 2 and 5.","@language… | Merged ChEBI/PubChem definitions into skos:definition |
| 236,616 | enrich_references | references | [] | [{"@id":"foodb.food:FDB002413","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedT… | Added references with provenance; cas_numbers=['95-87-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_191381']; candidate_pubchem_cids=[7267, 161803, 21886837]; selected_pubchem_cids=[7267]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 251,031 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H10O"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H10O"],"… | rdkit_pre_consensus from 'CC1=CC(=C(C=C1)C)O'; added: monoisotopic_mass |
| 255,791 | chebi_altlabels | altLabel | [] | [{"@value":"1,2,5-xylenol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… | Added 11 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 260,049 | consensus_match | altLabel | [{"@value":"1,2,5-xylenol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… | [{"@value":"1,2,5-xylenol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… | group_key=2,5-xylenol||dimension=Environmental > media=Air > indoor=Unknown; cas=95-87-4; added Common Chemistry CAS names as altLabel: NSC 2599, Phenol, 2,5-dimethyl-; object_uuid=fo-cc6a8700314615be |
| 260,050 | consensus_match | cas_match_labels | — | {"95-87-4":"exactMatch"} | group_key=2,5-xylenol||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'95-87-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-cc6a8700314615be: {'95-87-4': 'exactMatch'} |
| 276,215 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H10O"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H10O"],"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2,5-xylenol' |
| 282,795 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H10O"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H10O"],"… | rdkit_post_consensus from 'Cc1ccc(C)c(O)c1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 289,317 | strip_catalogue_altlabels | altLabel | [{"@value":"1,2,5-xylenol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… | [{"@value":"1,2,5-xylenol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… | Removed 2 catalogue altLabel value(s): 'FEMA 3595' (grade code), 'NSC 2599' (registry code) |
| 308,618 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/1c8bc05f-3344-… | associations resolved on the elementary layer |
| 390,554 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H10O"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H10O"],"… | typed the way the ontology types it |
| 398,211 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
19 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T0609040591070000/9877 | prefLabel | ef:agent/bootstrap_labels | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v0 | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v1 |
| ef:activity/change/20260821T0609040591070000/9878 | name | ef:agent/bootstrap_labels | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v1 | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v2 |
| ef:activity/change/20260821T0609040591070000/12815 | synonyms | ef:agent/bootstrap_labels | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v2 | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v3 |
| ef:activity/change/20260821T0609040591070000/55194 | context | ef:agent/default_context_mapping | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v3 | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v4 |
| ef:activity/change/20260821T0609040591070000/55195 | context_iri | ef:agent/default_context_mapping | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v4 | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v5 |
| ef:activity/change/20260821T0609040591070000/216621 | unit_iri | ef:agent/unit_normalization | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v5 | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v6 |
| ef:activity/change/20260821T0609040591070000/236614 | properties | ef:agent/enrich_references | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v6 | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v7 |
| ef:activity/change/20260821T0609040591070000/236615 | skos_definition | ef:agent/enrich_references | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v7 | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v8 |
| ef:activity/change/20260821T0609040591070000/236616 | references | ef:agent/enrich_references | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v8 | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v9 |
| ef:activity/change/20260821T0609040591070000/251031 | properties | ef:agent/rdkit_pre_consensus | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v9 | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v10 |
| ef:activity/change/20260821T0609040591070000/255791 | altLabel | ef:agent/chebi_altlabels | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v10 | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v11 |
| ef:activity/change/20260821T0609040591070000/260049 | altLabel | ef:agent/consensus_match | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v11 | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v12 |
| ef:activity/change/20260821T0609040591070000/260050 | cas_match_labels | ef:agent/consensus_match | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v12 | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v13 |
| ef:activity/change/20260821T0609040591070000/276215 | properties | ef:agent/opsin_iupac | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v13 | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v14 |
| ef:activity/change/20260821T0609040591070000/282795 | properties | ef:agent/rdkit_post_consensus | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v14 | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v15 |
| ef:activity/change/20260821T0609040591070000/289317 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v15 | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v16 |
| ef:activity/change/20260821T0609040591070000/308618 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v16 | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v17 |
| ef:activity/change/20260821T0609040591070000/390554 | properties | ef:agent/normalise_property_values | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v17 | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v18 |
| ef:activity/change/20260821T0609040591070000/398211 | types | ef:agent/link_flows_to_their_substance | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v18 | ef:flow/1c8bc05f-3344-461c-9cf1-e17cb0c0e601/v19 |