Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 36852' (registry code)
cas_match_labels 1 consensus_match group_key=2,6-dimethylnaphthalene||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'581-42-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-1d398134a54575ca: {'581-42-0': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['581-42-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34251']; candidate_pubchem_cids=[11387]; selected_pubchem_cids=[11387]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
16,726 bootstrap_labels prefLabel [{"@value":"2,6-dimethylnaphthalene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttri… Bootstrapped prefLabel from legacy name field
16,727 bootstrap_labels name 2,6-dimethylnaphthalene Purged legacy name field to enforce prefLabel usage
17,243 bootstrap_labels synonyms ["2,6-DMN","2,6-dimethylnaphthalene ion (1-)","2,6-dimethylnaphthalene picrate","AC1L1X91","AC1Q2OC4","Dimethylnaphthal… [] Removed legacy synonyms field in favor of structured labels
55,596 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
55,597 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
218,826 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
242,900 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
242,901 enrich_references skos_definition [{"@value":"A dimethylnaphthalene carrying methyl groups at positions 2 and 6.","@language":"en","provenance":{"prov:wa… Merged ChEBI/PubChem definitions into skos:definition
242,902 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J45.113D","provenance":{"prov:wasGeneratedBy":"enrich_referenc… Added references with provenance; cas_numbers=['581-42-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34251']; candidate_pubchem_cids=[11387]; selected_pubchem_cids=[11387]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
256,591 chebi_altlabels altLabel [] [{"@value":"2,6-DMN","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… Added 1 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
260,134 consensus_match altLabel [{"@value":"2,6-DMN","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"2,6-DMN","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… group_key=2,6-dimethylnaphthalene||dimension=Environmental > media=Air > indoor=Unknown; cas=581-42-0; added Common Chemistry CAS names as altLabel: NSC 36852, Naphthalene, 2,6-dimethyl-; object_uuid=fo-1d398134a54575ca
260,135 consensus_match cas_match_labels {"581-42-0":"exactMatch"} group_key=2,6-dimethylnaphthalene||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'581-42-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-1d398134a54575ca: {'581-42-0': 'exactMatch'}
278,048 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2,6-dimethylnaphthalene'
284,778 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12"],"… rdkit_post_consensus from 'Cc1ccc2cc(C)ccc2c1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
290,650 strip_catalogue_altlabels altLabel [{"@value":"2,6-DMN","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"2,6-DMN","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… Removed 1 catalogue altLabel value(s): 'NSC 36852' (registry code)
308,824 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/1d3779c7-2e21-… associations resolved on the elementary layer
392,403 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12"],"… typed the way the ontology types it
400,855 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
400,856 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_78298","rdfs:label":"environmental contaminant","http://www.w3.org/2004/0… the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1122181958110000/16726 prefLabel ef:agent/bootstrap_labels ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v0 ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v1
ef:activity/change/20260821T1122181958110000/16727 name ef:agent/bootstrap_labels ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v1 ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v2
ef:activity/change/20260821T1122181958110000/17243 synonyms ef:agent/bootstrap_labels ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v2 ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v3
ef:activity/change/20260821T1122181958110000/55596 context ef:agent/default_context_mapping ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v3 ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v4
ef:activity/change/20260821T1122181958110000/55597 context_iri ef:agent/default_context_mapping ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v4 ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v5
ef:activity/change/20260821T1122181958110000/218826 unit_iri ef:agent/unit_normalization ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v5 ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v6
ef:activity/change/20260821T1122181958110000/242900 properties ef:agent/enrich_references ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v6 ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v7
ef:activity/change/20260821T1122181958110000/242901 skos_definition ef:agent/enrich_references ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v7 ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v8
ef:activity/change/20260821T1122181958110000/242902 references ef:agent/enrich_references ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v8 ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v9
ef:activity/change/20260821T1122181958110000/256591 altLabel ef:agent/chebi_altlabels ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v9 ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v10
ef:activity/change/20260821T1122181958110000/260134 altLabel ef:agent/consensus_match ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v10 ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v11
ef:activity/change/20260821T1122181958110000/260135 cas_match_labels ef:agent/consensus_match ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v11 ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v12
ef:activity/change/20260821T1122181958110000/278048 properties ef:agent/opsin_iupac ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v12 ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v13
ef:activity/change/20260821T1122181958110000/284778 properties ef:agent/rdkit_post_consensus ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v13 ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v14
ef:activity/change/20260821T1122181958110000/290650 altLabel ef:agent/strip_catalogue_altlabels ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v14 ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v15
ef:activity/change/20260821T1122181958110000/308824 concept_associations ef:agent/carry_associations_onto_flows ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v15 ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v16
ef:activity/change/20260821T1122181958110000/392403 properties ef:agent/normalise_property_values ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v16 ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v17
ef:activity/change/20260821T1122181958110000/400855 types ef:agent/link_flows_to_their_substance ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v17 ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v18
ef:activity/change/20260821T1122181958110000/400856 roles ef:agent/link_flows_to_their_substance ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v18 ef:flow/1d3779c7-2e21-4700-9187-ebb46075c509/v19

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