Amobarbital
Everything that changed this flow. Back to the flow
1e07801e-8ea2-4b4d-9154-8721b8b46736
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 3 catalogue altLabel value(s): 'NSC 10815' (registry code), 'NSC 120800' (registry code), 'NSC 32406' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=amobarbital||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'57-43-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-c31f998139f46eb9: {'57-43-2': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['57-43-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_2673']; candidate_pubchem_cids=[2164, 124674327]; selected_pubchem_cids=[2164]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 13,912 | bootstrap_labels | prefLabel | — | [{"@value":"amobarbital","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… | Bootstrapped prefLabel from legacy name field |
| 13,913 | bootstrap_labels | name | amobarbital | — | Purged legacy name field to enforce prefLabel usage |
| 13,914 | bootstrap_labels | synonyms | ["2,4,6(1H,3H,5H)-Pyrimidinetrione, 5-ethyl-5-(3-methylbutyl)-","5-Ethyl-5-(3-methylbutyl)-2,4,6(1H,3H,5H)-pyrimidinetr… | [] | Removed legacy synonyms field in favor of structured labels |
| 56,058 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 56,059 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 217,935 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 224,314 | normalize_name_case | prefLabel | [{"@value":"amobarbital","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… | [{"@value":"Amobarbital","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 240,358 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H18N2O3… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 240,359 | enrich_references | skos_definition | — | [{"@value":"A member of the class of barbiturates that is pyrimidine-2,4,6(1H,3H,5H)-trione substituted by a 3-methylbu… | Merged ChEBI/PubChem definitions into skos:definition |
| 240,360 | enrich_references | references | [] | [{"@id":"drugcentral:184","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"c… | Added references with provenance; cas_numbers=['57-43-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_2673']; candidate_pubchem_cids=[2164, 124674327]; selected_pubchem_cids=[2164]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 252,109 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H18N2O3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H18N2O3… | rdkit_pre_consensus from 'CCC1(C(=O)NC(=O)NC1=O)CCC(C)C'; added: monoisotopic_mass |
| 256,261 | chebi_altlabels | altLabel | [] | [{"@value":"5-ethyl-5-(3-methylbutyl)-2,4,6(1H,3H,5H)-pyrimidinetrione","@language":"en","source":{"prov:wasGeneratedBy… | Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 263,859 | consensus_match | altLabel | [{"@value":"5-ethyl-5-(3-methylbutyl)-2,4,6(1H,3H,5H)-pyrimidinetrione","@language":"en","source":{"prov:wasGeneratedBy… | [{"@value":"5-ethyl-5-(3-methylbutyl)-2,4,6(1H,3H,5H)-pyrimidinetrione","@language":"en","source":{"prov:wasGeneratedBy… | group_key=amobarbital||dimension=Environmental > media=Ground > geography=Agricultural; cas=57-43-2; added Common Chemistry CAS names as altLabel: 2,4,6(1<em>H</em>,3<em>H</em>,5<em>H</em>)-Pyrimidinetrione, 5-ethyl-5-(3-methylbutyl)-, 5-Isoamyl-5-ethylbarbituric acid, Amal, Amasust, Amital, Amobarbitone, Amospan, Amybal, Amylbarbitone, Amylobarbital, Barbamyl acid, Barbituric acid, 5-ethyl-5-isopentyl-, Binoctal, Dorlotyn, Dormytal, Ethylisopentylbarbituric acid, Eunoctal, Isoamylethylbarbituric acid, Isomyl, Isomytal, Isopentobarbital, MeSH ID: D000654, Mylodorm, NSC 10815, NSC 120800, NSC 32406, Pentymal, Pentymalum, Robarb, Schiwanox, Sednotic, Somnal, Stadadorm, Sumital; object_uuid=fo-c31f998139f46eb9 |
| 263,860 | consensus_match | cas_match_labels | — | {"57-43-2":"exactMatch"} | group_key=amobarbital||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'57-43-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-c31f998139f46eb9: {'57-43-2': 'exactMatch'} |
| 277,303 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H18N2O3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H18N2O3… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '5-ethyl-5-(3-methylbutyl)-2,4,6(1H,3H,5H)-pyrimidinetrione' |
| 283,977 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H18N2O3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H18N2O3… | rdkit_post_consensus from 'CCC1(CCC(C)C)C(=O)NC(=O)NC1=O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 290,109 | strip_catalogue_altlabels | altLabel | [{"@value":"5-ethyl-5-(3-methylbutyl)-2,4,6(1H,3H,5H)-pyrimidinetrione","@language":"en","source":{"prov:wasGeneratedBy… | [{"@value":"5-ethyl-5-(3-methylbutyl)-2,4,6(1H,3H,5H)-pyrimidinetrione","@language":"en","source":{"prov:wasGeneratedBy… | Removed 3 catalogue altLabel value(s): 'NSC 10815' (registry code), 'NSC 120800' (registry code), 'NSC 32406' (registry code) |
| 309,057 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/1e07801e-8ea2-… | associations resolved on the elementary layer |
| 391,658 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H18N2O3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H18N2O3… | typed the way the ontology types it |
| 399,789 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/13912 | prefLabel | ef:agent/bootstrap_labels | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v0 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v1 |
| ef:activity/change/20260821T1554374006150000/13913 | name | ef:agent/bootstrap_labels | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v1 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v2 |
| ef:activity/change/20260821T1554374006150000/13914 | synonyms | ef:agent/bootstrap_labels | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v2 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v3 |
| ef:activity/change/20260821T1554374006150000/56058 | context | ef:agent/default_context_mapping | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v3 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v4 |
| ef:activity/change/20260821T1554374006150000/56059 | context_iri | ef:agent/default_context_mapping | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v4 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v5 |
| ef:activity/change/20260821T1554374006150000/217935 | unit_iri | ef:agent/unit_normalization | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v5 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v6 |
| ef:activity/change/20260821T1554374006150000/224314 | prefLabel | ef:agent/normalize_name_case | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v6 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v7 |
| ef:activity/change/20260821T1554374006150000/240358 | properties | ef:agent/enrich_references | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v7 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v8 |
| ef:activity/change/20260821T1554374006150000/240359 | skos_definition | ef:agent/enrich_references | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v8 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v9 |
| ef:activity/change/20260821T1554374006150000/240360 | references | ef:agent/enrich_references | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v9 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v10 |
| ef:activity/change/20260821T1554374006150000/252109 | properties | ef:agent/rdkit_pre_consensus | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v10 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v11 |
| ef:activity/change/20260821T1554374006150000/256261 | altLabel | ef:agent/chebi_altlabels | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v11 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v12 |
| ef:activity/change/20260821T1554374006150000/263859 | altLabel | ef:agent/consensus_match | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v12 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v13 |
| ef:activity/change/20260821T1554374006150000/263860 | cas_match_labels | ef:agent/consensus_match | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v13 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v14 |
| ef:activity/change/20260821T1554374006150000/277303 | properties | ef:agent/opsin_iupac | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v14 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v15 |
| ef:activity/change/20260821T1554374006150000/283977 | properties | ef:agent/rdkit_post_consensus | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v15 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v16 |
| ef:activity/change/20260821T1554374006150000/290109 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v16 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v17 |
| ef:activity/change/20260821T1554374006150000/309057 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v17 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v18 |
| ef:activity/change/20260821T1554374006150000/391658 | properties | ef:agent/normalise_property_values | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v18 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v19 |
| ef:activity/change/20260821T1554374006150000/399789 | types | ef:agent/link_flows_to_their_substance | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v19 | ef:flow/1e07801e-8ea2-4b4d-9154-8721b8b46736/v20 |