Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 6 catalogue altLabel value(s): 'BAY 77049' (grade code), 'Bayer 77049' (trade name), 'SAN 6538' (grade code), 'SAN 6626' (grade code), 'Sandoz 6538' (trade name), 'Sandoz 6626' (trade name)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=quinalphos||dimension=Environmental > media=Ground > geography=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'13593-03-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-388df873b2c1afaf: {'13593-03-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['13593-03-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_8712']; candidate_pubchem_cids=[26124]; selected_pubchem_cids=[26124]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
6,536 bootstrap_labels prefLabel [{"@value":"quinalphos","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Bootstrapped prefLabel from legacy name field
6,537 bootstrap_labels name quinalphos Purged legacy name field to enforce prefLabel usage
6,538 bootstrap_labels synonyms ["AC-12671","AC1L1AGO","BAY 5821","BAY 77049","Bayer 77049","Bayrusil","Chinalphos","Diethquinalphion","Diethquinalphio… [] Removed legacy synonyms field in favor of structured labels
56,646 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
56,647 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-noag Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
215,527 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,599 normalize_name_case prefLabel [{"@value":"quinalphos","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… [{"@value":"Quinalphos","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
233,464 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H15N2O3… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
233,465 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
233,466 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J8.128K","provenance":{"prov:wasGeneratedBy":"enrich_reference… Added references with provenance; cas_numbers=['13593-03-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_8712']; candidate_pubchem_cids=[26124]; selected_pubchem_cids=[26124]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
255,189 chebi_altlabels altLabel [] [{"@value":"Bayrusil","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
271,278 consensus_match altLabel [{"@value":"Bayrusil","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… [{"@value":"Bayrusil","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… group_key=quinalphos||dimension=Environmental > media=Ground > geography=Unknown; cas=13593-03-8; added Common Chemistry CAS names as altLabel: <em>O</em>,<em>O</em>-Diethyl <em>O</em>-(2-quinoxalyl) phosphorothionate, <em>O</em>,<em>O</em>-Diethyl <em>O</em>-(quinoxalin-2-yl) thiophosphate, <em>O</em>,<em>O</em>-Diethyl <em>O</em>-2-quinoxalinyl phosphorothioate, <em>O</em>,<em>O</em>-Diethyl-<em>O</em>-(2-quinoxalyl)thiophosphate, <em>O</em>,<em>O</em>-Diethyl-<em>O</em>-quinoxal-2-yl thionophosphate, BAY 77049, Bayer 77049, Chinalphos, Diethchinalphion, Diethquinalphion, Diethyl 2-quinoxalyl phosphorothionate, Ekalux, Ekalux 25EC, Ekalux G<sub>5</sub>, Kinalux, Oleoekalux, Phosphorothioic acid, <em>O</em>,<em>O</em>-diethyl <em>O</em>-2-quinoxalinyl ester, Quinalfos, Quinaltaf, SAN 6538, SAN 6626, Sandoz 6538, Sandoz 6626; object_uuid=fo-388df873b2c1afaf
271,279 consensus_match cas_match_labels {"13593-03-8":"exactMatch"} group_key=quinalphos||dimension=Environmental > media=Ground > geography=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'13593-03-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-388df873b2c1afaf: {'13593-03-8': 'exactMatch'}
275,283 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H15N2O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H15N2O3… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Diethyl O-(2-quinoxalyl) phosphorothioate'
281,787 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H15N2O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H15N2O3… rdkit_post_consensus from 'CCOP(=S)(OCC)Oc1cnc2ccccc2n1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,607 strip_catalogue_altlabels altLabel [{"@value":"Bayrusil","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… [{"@value":"Bayrusil","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… Removed 6 catalogue altLabel value(s): 'BAY 77049' (grade code), 'Bayer 77049' (trade name), 'SAN 6538' (grade code), 'SAN 6626' (grade code), 'Sandoz 6538' (trade name), 'Sandoz 6626' (trade name)
309,370 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/1f0d4c05-40c3-… associations resolved on the elementary layer
389,586 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H15N2O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H15N2O3… typed the way the ontology types it
396,791 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
396,792 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_22153","rdfs:label":"acaricide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/6536 prefLabel ef:agent/bootstrap_labels ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v0 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v1
ef:activity/change/20260820T0738569779880000/6537 name ef:agent/bootstrap_labels ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v1 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v2
ef:activity/change/20260820T0738569779880000/6538 synonyms ef:agent/bootstrap_labels ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v2 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v3
ef:activity/change/20260820T0738569779880000/56646 context ef:agent/default_context_mapping ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v3 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v4
ef:activity/change/20260820T0738569779880000/56647 context_iri ef:agent/default_context_mapping ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v4 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v5
ef:activity/change/20260820T0738569779880000/215527 unit_iri ef:agent/unit_normalization ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v5 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v6
ef:activity/change/20260820T0738569779880000/222599 prefLabel ef:agent/normalize_name_case ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v6 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v7
ef:activity/change/20260820T0738569779880000/233464 properties ef:agent/enrich_references ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v7 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v8
ef:activity/change/20260820T0738569779880000/233465 skos_definition ef:agent/enrich_references ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v8 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v9
ef:activity/change/20260820T0738569779880000/233466 references ef:agent/enrich_references ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v9 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v10
ef:activity/change/20260820T0738569779880000/255189 altLabel ef:agent/chebi_altlabels ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v10 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v11
ef:activity/change/20260820T0738569779880000/271278 altLabel ef:agent/consensus_match ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v11 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v12
ef:activity/change/20260820T0738569779880000/271279 cas_match_labels ef:agent/consensus_match ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v12 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v13
ef:activity/change/20260820T0738569779880000/275283 properties ef:agent/opsin_iupac ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v13 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v14
ef:activity/change/20260820T0738569779880000/281787 properties ef:agent/rdkit_post_consensus ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v14 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v15
ef:activity/change/20260820T0738569779880000/288607 altLabel ef:agent/strip_catalogue_altlabels ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v15 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v16
ef:activity/change/20260820T0738569779880000/309370 concept_associations ef:agent/carry_associations_onto_flows ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v16 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v17
ef:activity/change/20260820T0738569779880000/389586 properties ef:agent/normalise_property_values ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v17 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v18
ef:activity/change/20260820T0738569779880000/396791 types ef:agent/link_flows_to_their_substance ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v18 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v19
ef:activity/change/20260820T0738569779880000/396792 roles ef:agent/link_flows_to_their_substance ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v19 ef:flow/1f0d4c05-40c3-4aad-88ce-065fce01f492/v20

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