Arsenic Trioxide
Everything that changed this flow. Back to the flow
1f30883b-6556-11dd-ad8b-0800200c9a66
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus, withhold_ambiguous_mass | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, dedupe_altlabels | Deduplicated altLabel values and removed entries matching prefLabel |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=arsenictrioxide||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'1327-53-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f919dcd42a5427e5: {'1327-53-3': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['1327-53-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30621', 'http://purl.obolibrary.org/obo/CHEBI_49900']; candidate_pubchem_cids=[14888, 261004, 518605, 518740, 58886963]; selected_pubchem_cids=[518605]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
22| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 7,902 | bootstrap_labels | prefLabel | — | [{"@value":"arsenic trioxide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… | Bootstrapped prefLabel from legacy name field |
| 7,903 | bootstrap_labels | name | arsenic trioxide | — | Purged legacy name field to enforce prefLabel usage |
| 7,904 | bootstrap_labels | synonyms | ["AC1L24QX","Arseni trioxydum","Arsenic oxide (As2O3)","Arsenic trioxide (JP15/USAN)","Arsenic(III) trioxide","Arseniou… | [] | Removed legacy synonyms field in favor of structured labels |
| 56,810 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| 56,811 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-grou-agri | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| 215,981 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 222,959 | normalize_name_case | prefLabel | [{"@value":"arsenic trioxide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… | [{"@value":"Arsenic Trioxide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 234,749 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["As4O6","H3… | Added ChEBI/PubChem properties (chebi_ids=2, pubchem_cids=1) |
| 234,750 | enrich_references | skos_definition | — | [{"@value":"An arsenic oxide in which arsenic and oxygen atoms are present in the ratio 2:3.","@language":"en","provena… | Merged ChEBI/PubChem definitions into skos:definition |
| 234,751 | enrich_references | references | [] | [{"@id":"gmelin:1397624","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"co… | Added references with provenance; cas_numbers=['1327-53-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30621', 'http://purl.obolibrary.org/obo/CHEBI_49900']; candidate_pubchem_cids=[14888, 261004, 518605, 518740, 58886963]; selected_pubchem_cids=[518605]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 250,493 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["As4O6","H3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["As4O6","H3… | rdkit_pre_consensus from 'O1[As]2O[As]3O[As]1O[As](O2)O3'; added: monoisotopic_mass |
| 255,474 | chebi_altlabels | altLabel | [] | [{"@value":"Acide arsenieux","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | Added 21 ChEBI synonym(s) as altLabel from 2 linked ChEBI record(s) |
| 263,958 | consensus_match | altLabel | [{"@value":"Acide arsenieux","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | [{"@value":"Acide arsenieux","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | group_key=arsenictrioxide||dimension=Environmental > media=Air > strata=Unknown; cas=1327-53-3; added Common Chemistry CAS names as altLabel: Arsenic oxide (As<sub>2</sub>O<sub>3</sub>), Arsenic oxide (AsO<sub>1.5</sub>), Arsenic sesquioxide, Arsenic sesquioxide (As<sub>2</sub>O<sub>3</sub>), Arsenic(III) trioxide, Arsenicum album, Arsenious oxide, Arsenious trioxide, Arsenous anhydride, Arsodent, Trisenox, Trisonex; object_uuid=fo-f919dcd42a5427e5 |
| 263,959 | consensus_match | cas_match_labels | — | {"1327-53-3":"exactMatch"} | group_key=arsenictrioxide||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'1327-53-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f919dcd42a5427e5: {'1327-53-3': 'exactMatch'} |
| 275,677 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["As4O6","H3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["As4O6","H3… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'arsenous acid' |
| 282,217 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["As4O6","H3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["As4O6","H3… | rdkit_post_consensus from 'O[As](O)O'; added: monoisotopic_mass; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass |
| 286,903 | withhold_ambiguous_mass | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["As4O6","H3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["As4O6","H3… | withhold_ambiguous_mass: removed molecular_mass, monoisotopic_mass; the flow carries 2 candidate structures, so no one mass describes it |
| 292,405 | dedupe_altlabels | altLabel | [{"@value":"Acide arsenieux","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | [{"@value":"Acide arsenieux","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | Deduplicated altLabel values and removed entries matching prefLabel |
| 309,454 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/1f30883b-6556-… | associations resolved on the elementary layer |
| 390,008 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["As4O6","H3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["As4O6","H3… | typed the way the ontology types it |
| 397,422 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 397,423 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24852","rdfs:label":"insecticide","http://www.w3.org/2004/02/skos/core#de… | the substance's answer, copied onto its flow |
PROV-O trail
22 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T1555490862250000/7902 | prefLabel | ef:agent/bootstrap_labels | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v0 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v1 |
| ef:activity/change/20260820T1555490862250000/7903 | name | ef:agent/bootstrap_labels | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v1 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v2 |
| ef:activity/change/20260820T1555490862250000/7904 | synonyms | ef:agent/bootstrap_labels | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v2 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v3 |
| ef:activity/change/20260820T1555490862250000/56810 | context | ef:agent/default_context_mapping | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v3 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v4 |
| ef:activity/change/20260820T1555490862250000/56811 | context_iri | ef:agent/default_context_mapping | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v4 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v5 |
| ef:activity/change/20260820T1555490862250000/215981 | unit_iri | ef:agent/unit_normalization | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v5 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v6 |
| ef:activity/change/20260820T1555490862250000/222959 | prefLabel | ef:agent/normalize_name_case | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v6 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v7 |
| ef:activity/change/20260820T1555490862250000/234749 | properties | ef:agent/enrich_references | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v7 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v8 |
| ef:activity/change/20260820T1555490862250000/234750 | skos_definition | ef:agent/enrich_references | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v8 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v9 |
| ef:activity/change/20260820T1555490862250000/234751 | references | ef:agent/enrich_references | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v9 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v10 |
| ef:activity/change/20260820T1555490862250000/250493 | properties | ef:agent/rdkit_pre_consensus | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v10 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v11 |
| ef:activity/change/20260820T1555490862250000/255474 | altLabel | ef:agent/chebi_altlabels | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v11 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v12 |
| ef:activity/change/20260820T1555490862250000/263958 | altLabel | ef:agent/consensus_match | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v12 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v13 |
| ef:activity/change/20260820T1555490862250000/263959 | cas_match_labels | ef:agent/consensus_match | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v13 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v14 |
| ef:activity/change/20260820T1555490862250000/275677 | properties | ef:agent/opsin_iupac | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v14 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v15 |
| ef:activity/change/20260820T1555490862250000/282217 | properties | ef:agent/rdkit_post_consensus | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v15 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v16 |
| ef:activity/change/20260820T1555490862250000/286903 | properties | ef:agent/withhold_ambiguous_mass | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v16 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v17 |
| ef:activity/change/20260820T1555490862250000/292405 | altLabel | ef:agent/dedupe_altlabels | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v17 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v18 |
| ef:activity/change/20260820T1555490862250000/309454 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v18 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v19 |
| ef:activity/change/20260820T1555490862250000/390008 | properties | ef:agent/normalise_property_values | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v19 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v20 |
| ef:activity/change/20260820T1555490862250000/397422 | types | ef:agent/link_flows_to_their_substance | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v20 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v21 |
| ef:activity/change/20260820T1555490862250000/397423 | roles | ef:agent/link_flows_to_their_substance | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v21 | ef:flow/1f30883b-6556-11dd-ad8b-0800200c9a66/v22 |