Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 7 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_authoritative, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
prefLabel 3 bootstrap_labels, flow_layers.pubchem_element_enrichment, normalize_name_case element name from the flow object: Terbium
altLabel 2 chebi_altlabels, consensus_match group_key=terbium||dimension=Resource > media=Ground; cas=7440-27-9; added Common Chemistry CAS names as altLabel: MeSH ID: D013725, Terbium-159; object_uuid=fo-c7695e9722cbf35c
cas_match_labels 1 consensus_match group_key=terbium||dimension=Resource > media=Ground; group_sources=['chebi', 'ec_inventory']; cas_sources={'7440-27-9': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-c7695e9722cbf35c: {'7440-27-9': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 231-137-6 from CAS 7440-27-9
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7440-27-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33376']; candidate_pubchem_cids=[23958, 177839075]; selected_pubchem_cids=[23958]; formula_similarity_expected=['Tb']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

23
# Step Field From To Why
17,890 bootstrap_labels prefLabel [{"@value":"terbium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… Bootstrapped prefLabel from legacy name field
17,891 bootstrap_labels name terbium Purged legacy name field to enforce prefLabel usage
17,892 bootstrap_labels synonyms ["65Tb","AC1L2N41","AC1Q233T","TB","terbio"] [] Removed legacy synonyms field in favor of structured labels
57,666 default_context_mapping context {"dimension":"Resource","media":"Ground"} Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
57,667 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/reso-grou Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
219,203 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,189 normalize_name_case prefLabel [{"@value":"terbium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… [{"@value":"Terbium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
227,031 ec_cross_check ec_numbers [] ["231-137-6"] Resolved from EC-inventory: 231-137-6 from CAS 7440-27-9
243,948 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Tb"],"atte… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
243,949 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
243,950 enrich_references references [] [{"@id":"gmelin:16311","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… Added references with provenance; cas_numbers=['7440-27-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33376']; candidate_pubchem_cids=[23958, 177839075]; selected_pubchem_cids=[23958]; formula_similarity_expected=['Tb']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
253,155 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Tb"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Tb"],"atte… rdkit_pre_consensus from '[Tb]'; added: monoisotopic_mass
256,746 chebi_altlabels altLabel [] [{"@value":"65Tb","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
272,304 consensus_match altLabel [{"@value":"65Tb","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"65Tb","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… group_key=terbium||dimension=Resource > media=Ground; cas=7440-27-9; added Common Chemistry CAS names as altLabel: MeSH ID: D013725, Terbium-159; object_uuid=fo-c7695e9722cbf35c
272,305 consensus_match cas_match_labels {"7440-27-9":"exactMatch"} group_key=terbium||dimension=Resource > media=Ground; group_sources=['chebi', 'ec_inventory']; cas_sources={'7440-27-9': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-c7695e9722cbf35c: {'7440-27-9': 'exactMatch'}
278,374 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Tb"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Tb"],"atte… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Terbium'
279,783 rdkit_authoritative properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Tb"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… rdkit_authoritative: set definitive structural data from unique InChI
285,131 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… rdkit_post_consensus from '[Tb]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
309,882 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/1f31c0ad-6556-… associations resolved on the elementary layer
392,740 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… typed the way the ontology types it
401,344 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalElement"] the substance's answer, copied onto its flow
401,345 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… the substance's answer, copied onto its flow
403,843 flow_layers.pubchem_element_enrichment prefLabel [{"@value":"Terbium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… [{"@value":"Terbium","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_enrichm… element name from the flow object: Terbium

PROV-O trail

23 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1555490862250000/17890 prefLabel ef:agent/bootstrap_labels ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v0 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v1
ef:activity/change/20260820T1555490862250000/17891 name ef:agent/bootstrap_labels ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v1 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v2
ef:activity/change/20260820T1555490862250000/17892 synonyms ef:agent/bootstrap_labels ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v2 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v3
ef:activity/change/20260820T1555490862250000/57666 context ef:agent/default_context_mapping ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v3 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v4
ef:activity/change/20260820T1555490862250000/57667 context_iri ef:agent/default_context_mapping ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v4 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v5
ef:activity/change/20260820T1555490862250000/219203 unit_iri ef:agent/unit_normalization ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v5 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v6
ef:activity/change/20260820T1555490862250000/225189 prefLabel ef:agent/normalize_name_case ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v6 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v7
ef:activity/change/20260820T1555490862250000/227031 ec_numbers ef:agent/ec_cross_check ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v7 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v8
ef:activity/change/20260820T1555490862250000/243948 properties ef:agent/enrich_references ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v8 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v9
ef:activity/change/20260820T1555490862250000/243949 skos_definition ef:agent/enrich_references ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v9 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v10
ef:activity/change/20260820T1555490862250000/243950 references ef:agent/enrich_references ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v10 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v11
ef:activity/change/20260820T1555490862250000/253155 properties ef:agent/rdkit_pre_consensus ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v11 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v12
ef:activity/change/20260820T1555490862250000/256746 altLabel ef:agent/chebi_altlabels ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v12 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v13
ef:activity/change/20260820T1555490862250000/272304 altLabel ef:agent/consensus_match ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v13 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v14
ef:activity/change/20260820T1555490862250000/272305 cas_match_labels ef:agent/consensus_match ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v14 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v15
ef:activity/change/20260820T1555490862250000/278374 properties ef:agent/opsin_iupac ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v15 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v16
ef:activity/change/20260820T1555490862250000/279783 properties ef:agent/rdkit_authoritative ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v16 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v17
ef:activity/change/20260820T1555490862250000/285131 properties ef:agent/rdkit_post_consensus ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v17 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v18
ef:activity/change/20260820T1555490862250000/309882 concept_associations ef:agent/carry_associations_onto_flows ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v18 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v19
ef:activity/change/20260820T1555490862250000/392740 properties ef:agent/normalise_property_values ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v19 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v20
ef:activity/change/20260820T1555490862250000/401344 types ef:agent/link_flows_to_their_substance ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v20 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v21
ef:activity/change/20260820T1555490862250000/401345 properties ef:agent/link_flows_to_their_substance ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v21 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v22
ef:activity/change/20260820T1555490862250000/403843 prefLabel ef:agent/flow_layers.pubchem_element_enrichment ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v22 ef:flow/1f31c0ad-6556-11dd-ad8b-0800200c9a66/v23

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