Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 4 catalogue altLabel value(s): 'ER 115' (grade code), 'K 3917' (grade code), 'NSC 246303' (registry code), 'Wy 3917' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=temazepam||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'846-50-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fa4f5b797ae18b01: {'846-50-4': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['846-50-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_9435']; candidate_pubchem_cids=[5391]; selected_pubchem_cids=[5391]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
9,534 bootstrap_labels prefLabel [{"@value":"temazepam","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Bootstrapped prefLabel from legacy name field
9,535 bootstrap_labels name temazepam Purged legacy name field to enforce prefLabel usage
9,536 bootstrap_labels synonyms ["organic","temazepam"] [] Removed legacy synonyms field in favor of structured labels
59,028 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
59,029 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
216,509 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,335 normalize_name_case prefLabel [{"@value":"temazepam","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… [{"@value":"Temazepam","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
236,294 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClN2… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
236,295 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
236,296 enrich_references references [] [{"@id":"drugcentral:2585","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… Added references with provenance; cas_numbers=['846-50-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_9435']; candidate_pubchem_cids=[5391]; selected_pubchem_cids=[5391]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,934 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClN2… rdkit_pre_consensus from 'CN1C(=O)C(O)N=C(c2ccccc2)c2cc(Cl)ccc21'; added: monoisotopic_mass
255,744 chebi_altlabels altLabel [] [{"@value":"(RS)-Temazepam","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
272,272 consensus_match altLabel [{"@value":"(RS)-Temazepam","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… [{"@value":"(RS)-Temazepam","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… group_key=temazepam||dimension=Environmental > media=Air > strata=Unknown; cas=846-50-4; added Common Chemistry CAS names as altLabel: (±)-Temazepam, 1-Methyl-3-hydroxy-5-phenyl-7-chloro-1,3-dihydro-2<em>H</em>-1,4-benzodiazepin-2-one, 2<em>H</em>-1,4-Benzodiazepin-2-one, 7-chloro-1,3-dihydro-3-hydroxy-1-methyl-5-phenyl-, 3-Hydroxydiazepam, 7-Chloro-1,3-dihydro-1-methyl-3-hydroxy-5-phenyl-2<em>H</em>-1,4-benzodiazepin-2-one, 7-Chloro-1,3-dihydro-3-hydroxy-1-methyl-5-phenyl-2<em>H</em>-1,4-benzodiazepin-2-one, 7-Chloro-1,3-dihydro-5-phenyl-3-hydroxy-1-methyl-2<em>H</em>-1,4-benzodiazepin-2-one, 7-Chloro-3-hydroxy-1-methyl-2-oxo-5-phenyl-3<em>H</em>-1,4-benzodiazepine, <em>N</em>-Methyloxazepam, Crisonar, ER 115, Euhypnos, Euipnos, Gelthix, K 3917, MeSH ID: D013693, Methyloxazepam, NSC 246303, Normison, Oxydiazepam, Perdorm, Planum, Racemic temazepam, Remestan, Restoril, Ro 5-5345, Ro 5-5354, Signopam, Tenox, Tenox (pharmaceutical), Wy 3917; object_uuid=fo-fa4f5b797ae18b01
272,273 consensus_match cas_match_labels {"846-50-4":"exactMatch"} group_key=temazepam||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'846-50-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fa4f5b797ae18b01: {'846-50-4': 'exactMatch'}
276,123 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClN2… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '1-Methyl-3-hydroxy-5-phenyl-7-chloro-1,3-dihydro-2H-1,4-benzodiazepin-2-one'
282,698 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClN2… rdkit_post_consensus from 'CN1C(=O)C(O)N=C(c2ccccc2)c2cc(Cl)ccc21'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,250 strip_catalogue_altlabels altLabel [{"@value":"(RS)-Temazepam","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… [{"@value":"(RS)-Temazepam","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… Removed 4 catalogue altLabel value(s): 'ER 115' (grade code), 'K 3917' (grade code), 'NSC 246303' (registry code), 'Wy 3917' (grade code)
310,536 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/217aea75-7262-… associations resolved on the elementary layer
390,465 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClN2… typed the way the ontology types it
398,088 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1302361922970000/9534 prefLabel ef:agent/bootstrap_labels ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v0 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v1
ef:activity/change/20260821T1302361922970000/9535 name ef:agent/bootstrap_labels ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v1 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v2
ef:activity/change/20260821T1302361922970000/9536 synonyms ef:agent/bootstrap_labels ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v2 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v3
ef:activity/change/20260821T1302361922970000/59028 context ef:agent/default_context_mapping ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v3 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v4
ef:activity/change/20260821T1302361922970000/59029 context_iri ef:agent/default_context_mapping ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v4 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v5
ef:activity/change/20260821T1302361922970000/216509 unit_iri ef:agent/unit_normalization ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v5 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v6
ef:activity/change/20260821T1302361922970000/223335 prefLabel ef:agent/normalize_name_case ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v6 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v7
ef:activity/change/20260821T1302361922970000/236294 properties ef:agent/enrich_references ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v7 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v8
ef:activity/change/20260821T1302361922970000/236295 skos_definition ef:agent/enrich_references ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v8 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v9
ef:activity/change/20260821T1302361922970000/236296 references ef:agent/enrich_references ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v9 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v10
ef:activity/change/20260821T1302361922970000/250934 properties ef:agent/rdkit_pre_consensus ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v10 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v11
ef:activity/change/20260821T1302361922970000/255744 altLabel ef:agent/chebi_altlabels ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v11 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v12
ef:activity/change/20260821T1302361922970000/272272 altLabel ef:agent/consensus_match ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v12 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v13
ef:activity/change/20260821T1302361922970000/272273 cas_match_labels ef:agent/consensus_match ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v13 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v14
ef:activity/change/20260821T1302361922970000/276123 properties ef:agent/opsin_iupac ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v14 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v15
ef:activity/change/20260821T1302361922970000/282698 properties ef:agent/rdkit_post_consensus ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v15 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v16
ef:activity/change/20260821T1302361922970000/289250 altLabel ef:agent/strip_catalogue_altlabels ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v16 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v17
ef:activity/change/20260821T1302361922970000/310536 concept_associations ef:agent/carry_associations_onto_flows ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v17 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v18
ef:activity/change/20260821T1302361922970000/390465 properties ef:agent/normalise_property_values ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v18 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v19
ef:activity/change/20260821T1302361922970000/398088 types ef:agent/link_flows_to_their_substance ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v19 ef:flow/217aea75-7262-40d0-b64f-cda0ccad333b/v20

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