Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=10141-05-6; cc_chebi_agreed_name='Cobalt dinitrate'; object_uuid=fo-a2df1010465c546f
cas_match_labels 1 consensus_match group_key=cobalt(2+)dinitrate||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'10141-05-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-a2df1010465c546f: {'10141-05-6': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['10141-05-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_86209']; candidate_pubchem_cids=[25000, 49874490]; selected_pubchem_cids=[25000]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
13,060 bootstrap_labels prefLabel [{"@value":"cobalt(2+) dinitrate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribut… Bootstrapped prefLabel from legacy name field
13,061 bootstrap_labels name cobalt(2+) dinitrate Purged legacy name field to enforce prefLabel usage
13,062 bootstrap_labels synonyms ["inorganic","cobaltdinitrate","cobalt(ii)dinitrate","cobaltbis(nitrate)","cobaltnitrate","cobaltnitrate(co(no3)2)(7ci)… [] Removed legacy synonyms field in favor of structured labels
59,158 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Ocean"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
59,159 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-ocea Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
217,657 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,116 normalize_name_case prefLabel [{"@value":"cobalt(2+) dinitrate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribut… [{"@value":"Cobalt(2+) Dinitrate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribut… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
239,569 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Co.2NO3","… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
239,570 enrich_references skos_definition [{"@value":"A cobalt salt in which the cobalt metal is in the +2 oxidation state and the counter-anion is nitrate.","@l… Merged ChEBI/PubChem definitions into skos:definition
239,571 enrich_references references [] [{"@id":"https://chem.echa.europa.eu/100.030.353","provenance":{"prov:wasGeneratedBy":"enrich_references.pubchem_identi… Added references with provenance; cas_numbers=['10141-05-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_86209']; candidate_pubchem_cids=[25000, 49874490]; selected_pubchem_cids=[25000]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
251,880 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Co.2NO3","… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Co.2NO3","… rdkit_pre_consensus from 'O=[N+]([O-])[O-].O=[N+]([O-])[O-].[Co+2]'; added: monoisotopic_mass
256,167 chebi_altlabels altLabel [] [{"@value":"Co(NO3)2","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
265,262 consensus_match prefLabel [{"@value":"Cobalt(2+) Dinitrate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribut… [{"@value":"Cobalt dinitrate","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo"… cas=10141-05-6; cc_chebi_agreed_name='Cobalt dinitrate'; object_uuid=fo-a2df1010465c546f
265,263 consensus_match altLabel [{"@value":"Co(NO3)2","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… [{"@value":"Co(NO3)2","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… cas=10141-05-6; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-a2df1010465c546f
265,264 consensus_match altLabel [{"@value":"Co(NO3)2","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… [{"@value":"Co(NO3)2","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… group_key=cobalt(2+)dinitrate||dimension=Environmental > media=Ground > geography=Agricultural; cas=10141-05-6; added Common Chemistry CAS names as altLabel: 3N5, Cobalt nitrate (Co(NO<sub>3</sub>)<sub>2</sub>), Nitric acid, cobalt(2+) salt, Nitric acid, cobalt(2+) salt (2:1); object_uuid=fo-a2df1010465c546f
265,265 consensus_match cas_match_labels {"10141-05-6":"exactMatch"} group_key=cobalt(2+)dinitrate||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'10141-05-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-a2df1010465c546f: {'10141-05-6': 'exactMatch'}
277,072 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Co.2NO3","… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Co.2NO3","… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Cobalt dinitrate'
283,728 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Co.2NO3","… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Co.2NO3","… rdkit_post_consensus from 'O=[N+]([O-])[O-].O=[N+]([O-])[O-].[Co+2]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,670 dedupe_altlabels altLabel [{"@value":"Co(NO3)2","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… [{"@value":"Co(NO3)2","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… Deduplicated altLabel values and removed entries matching prefLabel
310,601 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/21bbcacb-3867-… associations resolved on the elementary layer
391,423 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Co.2NO3","… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Co.2NO3","… typed the way the ontology types it
399,449 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalSalt"] the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/13060 prefLabel ef:agent/bootstrap_labels ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v0 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v1
ef:activity/change/20260822T0600486828500000/13061 name ef:agent/bootstrap_labels ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v1 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v2
ef:activity/change/20260822T0600486828500000/13062 synonyms ef:agent/bootstrap_labels ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v2 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v3
ef:activity/change/20260822T0600486828500000/59158 context ef:agent/default_context_mapping ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v3 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v4
ef:activity/change/20260822T0600486828500000/59159 context_iri ef:agent/default_context_mapping ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v4 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v5
ef:activity/change/20260822T0600486828500000/217657 unit_iri ef:agent/unit_normalization ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v5 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v6
ef:activity/change/20260822T0600486828500000/224116 prefLabel ef:agent/normalize_name_case ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v6 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v7
ef:activity/change/20260822T0600486828500000/239569 properties ef:agent/enrich_references ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v7 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v8
ef:activity/change/20260822T0600486828500000/239570 skos_definition ef:agent/enrich_references ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v8 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v9
ef:activity/change/20260822T0600486828500000/239571 references ef:agent/enrich_references ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v9 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v10
ef:activity/change/20260822T0600486828500000/251880 properties ef:agent/rdkit_pre_consensus ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v10 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v11
ef:activity/change/20260822T0600486828500000/256167 altLabel ef:agent/chebi_altlabels ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v11 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v12
ef:activity/change/20260822T0600486828500000/265262 prefLabel ef:agent/consensus_match ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v12 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v13
ef:activity/change/20260822T0600486828500000/265263 altLabel ef:agent/consensus_match ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v13 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v14
ef:activity/change/20260822T0600486828500000/265264 altLabel ef:agent/consensus_match ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v14 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v15
ef:activity/change/20260822T0600486828500000/265265 cas_match_labels ef:agent/consensus_match ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v15 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v16
ef:activity/change/20260822T0600486828500000/277072 properties ef:agent/opsin_iupac ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v16 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v17
ef:activity/change/20260822T0600486828500000/283728 properties ef:agent/rdkit_post_consensus ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v17 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v18
ef:activity/change/20260822T0600486828500000/292670 altLabel ef:agent/dedupe_altlabels ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v18 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v19
ef:activity/change/20260822T0600486828500000/310601 concept_associations ef:agent/carry_associations_onto_flows ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v19 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v20
ef:activity/change/20260822T0600486828500000/391423 properties ef:agent/normalise_property_values ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v20 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v21
ef:activity/change/20260822T0600486828500000/399449 types ef:agent/link_flows_to_their_substance ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v21 ef:flow/21bbcacb-3867-49f5-92a5-33c026ff0c32/v22

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