Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 122759' (registry code)
cas_match_labels 1 consensus_match group_key=(2e,4e,6e,8e)-3,7-dimethyl-9-(2,6,6-trimethylcyclohexen-1-yl)nona-2,4,6,8-tetraen-1-ol||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'68-26-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-219da024c89aea13: {'68-26-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['68-26-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_17336']; candidate_pubchem_cids=[1071, 70087, 445354, 638015]; selected_pubchem_cids=[445354]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
14,026 bootstrap_labels prefLabel [{"@value":"(2e,4e,6e,8e)-3,7-dimethyl-9-(2,6,6-trimethylcyclohexen-1-yl)nona-2,4,6,8-tetraen-1-ol","@language":"en","s… Bootstrapped prefLabel from legacy name field
14,027 bootstrap_labels name (2e,4e,6e,8e)-3,7-dimethyl-9-(2,6,6-trimethylcyclohexen-1-yl)nona-2,4,6,8-tetraen-1-ol Purged legacy name field to enforce prefLabel usage
14,028 bootstrap_labels synonyms ["organic","retinol"] [] Removed legacy synonyms field in favor of structured labels
59,400 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
59,401 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
217,977 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
240,469 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H30O"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
240,470 enrich_references skos_definition [{"@value":"A retinol in which all four exocyclic double bonds have E- (trans-) geometry.","@language":"en","provenance… Merged ChEBI/PubChem definitions into skos:definition
240,471 enrich_references references [] [{"@id":"beilstein:403040","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… Added references with provenance; cas_numbers=['68-26-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_17336']; candidate_pubchem_cids=[1071, 70087, 445354, 638015]; selected_pubchem_cids=[445354]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,148 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H30O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H30O"],… rdkit_pre_consensus from 'CC1=C(/C=C/C(C)=C/C=C/C(C)=C/CO)C(C)(C)CCC1'; added: monoisotopic_mass
256,282 chebi_altlabels altLabel [] [{"@value":"(2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraen-1-ol","@language":"en"… Added 20 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
257,652 consensus_match altLabel [{"@value":"(2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraen-1-ol","@language":"en"… [{"@value":"(2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraen-1-ol","@language":"en"… group_key=(2e,4e,6e,8e)-3,7-dimethyl-9-(2,6,6-trimethylcyclohexen-1-yl)nona-2,4,6,8-tetraen-1-ol||dimension=Environmental > media=Water > water_body=Ocean; cas=68-26-8; added Common Chemistry CAS names as altLabel: 2,4,6,8-Nonatetraen-1-ol, 3,7-dimethyl-9-(2,6,6-trimethyl-1-cyclohexen-1-yl)-, (<em>all</em>-<em>E</em>)-, <em>all</em>-<em>trans</em>-Vitamin A<sub>1</sub>, <em>trans</em>-Vitamin A alcohol, A-Mulsal, A-Sol, A-Vi-Pel, A-Vitan, Acon, Afaxin, Agiolan, Agoncal, Alcovit A, Alphasterol, Anatola, Anatola A, Anti-Infective vitamin, Antixerophthalmic vitamin, Aoral, Apexol, Apostavit, Aquasol A Parenteral, Aquasynth, Atav, Avibon, Avita, Avitol, Axerol, Axerophthol, Bentavit A, Biosterol, Cylasphere, Disatabs Tabs, Dofsol, Dohyfral A, Epiteliol, Hi-A-Vita, Lard Factor, Myvpack, NSC 122759, Nio-A-Let, Oleovitamin a, Ophthalamin, Plivit A, Prepalin, Retinol 50C, Retinol, <em>all</em>-<em>trans</em>-, Retinyl A, Riken Dry A-S 200PT, Tagravit R 1, Tegosphere VitA, Testavol, Thalasphere, Vaflol, Veroftal, Vi-Alpha, Vi-Dom-A, Vitamin A alcohol, <em>all</em>-<em>trans</em>-, Vitamin A<sub>1</sub> alcohol, <em>all</em>-<em>trans</em>-, Vitamin A<sub>1</sub>, <em>all</em>-<em>trans</em>-, Vitavel A, Vitpex, Vogan, Vogan-Neu, β-Retinol; object_uuid=fo-219da024c89aea13
257,653 consensus_match cas_match_labels {"68-26-8":"exactMatch"} group_key=(2e,4e,6e,8e)-3,7-dimethyl-9-(2,6,6-trimethylcyclohexen-1-yl)nona-2,4,6,8-tetraen-1-ol||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'68-26-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-219da024c89aea13: {'68-26-8': 'exactMatch'}
277,356 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H30O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H30O"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(2e,4e,6e,8e)-3,7-dimethyl-9-(2,6,6-trimethylcyclohexen-1-yl)nona-2,4,6,8-tetraen-1-ol'
284,032 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H30O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H30O"],… rdkit_post_consensus from 'CC1=C(/C=C/C(C)=C/C=C/C(C)=C/CO)C(C)(C)CCC1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
290,152 strip_catalogue_altlabels altLabel [{"@value":"(2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraen-1-ol","@language":"en"… [{"@value":"(2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraen-1-ol","@language":"en"… Removed 1 catalogue altLabel value(s): 'NSC 122759' (registry code)
310,739 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/221e139e-410f-… associations resolved on the elementary layer
391,715 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H30O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H30O"],… typed the way the ontology types it
399,859 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
399,860 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H30O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H30O"],… the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1416470405690000/14026 prefLabel ef:agent/bootstrap_labels ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v0 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v1
ef:activity/change/20260820T1416470405690000/14027 name ef:agent/bootstrap_labels ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v1 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v2
ef:activity/change/20260820T1416470405690000/14028 synonyms ef:agent/bootstrap_labels ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v2 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v3
ef:activity/change/20260820T1416470405690000/59400 context ef:agent/default_context_mapping ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v3 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v4
ef:activity/change/20260820T1416470405690000/59401 context_iri ef:agent/default_context_mapping ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v4 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v5
ef:activity/change/20260820T1416470405690000/217977 unit_iri ef:agent/unit_normalization ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v5 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v6
ef:activity/change/20260820T1416470405690000/240469 properties ef:agent/enrich_references ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v6 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v7
ef:activity/change/20260820T1416470405690000/240470 skos_definition ef:agent/enrich_references ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v7 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v8
ef:activity/change/20260820T1416470405690000/240471 references ef:agent/enrich_references ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v8 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v9
ef:activity/change/20260820T1416470405690000/252148 properties ef:agent/rdkit_pre_consensus ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v9 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v10
ef:activity/change/20260820T1416470405690000/256282 altLabel ef:agent/chebi_altlabels ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v10 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v11
ef:activity/change/20260820T1416470405690000/257652 altLabel ef:agent/consensus_match ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v11 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v12
ef:activity/change/20260820T1416470405690000/257653 cas_match_labels ef:agent/consensus_match ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v12 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v13
ef:activity/change/20260820T1416470405690000/277356 properties ef:agent/opsin_iupac ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v13 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v14
ef:activity/change/20260820T1416470405690000/284032 properties ef:agent/rdkit_post_consensus ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v14 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v15
ef:activity/change/20260820T1416470405690000/290152 altLabel ef:agent/strip_catalogue_altlabels ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v15 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v16
ef:activity/change/20260820T1416470405690000/310739 concept_associations ef:agent/carry_associations_onto_flows ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v16 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v17
ef:activity/change/20260820T1416470405690000/391715 properties ef:agent/normalise_property_values ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v17 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v18
ef:activity/change/20260820T1416470405690000/399859 types ef:agent/link_flows_to_their_substance ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v18 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v19
ef:activity/change/20260820T1416470405690000/399860 properties ef:agent/link_flows_to_their_substance ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v19 ef:flow/221e139e-410f-4d95-94fa-8416d36e26c2/v20

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