Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 4893' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=3,7-dimethyloct-6-en-1-ylacetate||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'150-84-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-584de69400547289: {'150-84-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['150-84-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_70478']; candidate_pubchem_cids=[9017, 76519729]; selected_pubchem_cids=[9017]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
19,058 bootstrap_labels prefLabel [{"@value":"3,7-dimethyloct-6-en-1-yl acetate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","pro… Bootstrapped prefLabel from legacy name field
19,059 bootstrap_labels name 3,7-dimethyloct-6-en-1-yl acetate Purged legacy name field to enforce prefLabel usage
19,060 bootstrap_labels synonyms ["organic","citronellylacetate"] [] Removed legacy synonyms field in favor of structured labels
61,422 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Ocean"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
61,423 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-ocea Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
219,552 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,429 normalize_name_case prefLabel [{"@value":"3,7-dimethyloct-6-en-1-yl acetate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","pro… [{"@value":"3,7-dimethyloct-6-en-1-yl Acetate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","pro… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
244,924 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H22O2"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
244,925 enrich_references skos_definition [{"@value":"A monoterpenoid that is the acetate ester of citronellol. It has been isolated from Citrus hystrix.","@lang… Merged ChEBI/PubChem definitions into skos:definition
244,926 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J2.964E","provenance":{"prov:wasGeneratedBy":"enrich_reference… Added references with provenance; cas_numbers=['150-84-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_70478']; candidate_pubchem_cids=[9017, 76519729]; selected_pubchem_cids=[9017]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
256,866 chebi_altlabels altLabel [] [{"@value":"3,7-Dimethyl-6-octen-1-yl acetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov… Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
261,675 consensus_match altLabel [{"@value":"3,7-Dimethyl-6-octen-1-yl acetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov… [{"@value":"3,7-Dimethyl-6-octen-1-yl acetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov… group_key=3,7-dimethyloct-6-en-1-ylacetate||dimension=Environmental > media=Water > water_body=Ocean; cas=150-84-5; added Common Chemistry CAS names as altLabel: (±)-Citronellyl acetate, 1-Acetoxy-3,7-dimethyloct-6-ene, 3,7-Dimethyloct-6-enyl acetate, 6-Octen-1-ol, 3,7-dimethyl-, 1-acetate, 6-Octen-1-ol, 3,7-dimethyl-, acetate, 8-Acetoxy-2,6-dimethyl-2-octene, <em>O</em>-Acetyl-β-citronellol, <em>dl</em>-Citronellol acetate, Cephrol acetate, Citronellol acetate, Citronellyl acetate, NSC 4893, β-Citronellol acetate, β-Citronellyl acetate; object_uuid=fo-584de69400547289
261,676 consensus_match cas_match_labels {"150-84-5":"exactMatch"} group_key=3,7-dimethyloct-6-en-1-ylacetate||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'150-84-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-584de69400547289: {'150-84-5': 'exactMatch'}
278,642 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H22O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H22O2"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '3,7-dimethyloct-6-en-1-yl Acetate'
285,420 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H22O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H22O2"]… rdkit_post_consensus from 'CC(=O)OCCC(C)CCC=C(C)C'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,084 strip_catalogue_altlabels altLabel [{"@value":"3,7-Dimethyl-6-octen-1-yl acetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov… [{"@value":"3,7-Dimethyl-6-octen-1-yl acetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov… Removed 1 catalogue altLabel value(s): 'NSC 4893' (registry code)
311,730 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/2587d88b-4ee9-… associations resolved on the elementary layer
393,007 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H22O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H22O2"]… typed the way the ontology types it
401,755 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1302361922970000/19058 prefLabel ef:agent/bootstrap_labels ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v0 ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v1
ef:activity/change/20260821T1302361922970000/19059 name ef:agent/bootstrap_labels ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v1 ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v2
ef:activity/change/20260821T1302361922970000/19060 synonyms ef:agent/bootstrap_labels ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v2 ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v3
ef:activity/change/20260821T1302361922970000/61422 context ef:agent/default_context_mapping ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v3 ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v4
ef:activity/change/20260821T1302361922970000/61423 context_iri ef:agent/default_context_mapping ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v4 ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v5
ef:activity/change/20260821T1302361922970000/219552 unit_iri ef:agent/unit_normalization ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v5 ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v6
ef:activity/change/20260821T1302361922970000/225429 prefLabel ef:agent/normalize_name_case ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v6 ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v7
ef:activity/change/20260821T1302361922970000/244924 properties ef:agent/enrich_references ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v7 ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v8
ef:activity/change/20260821T1302361922970000/244925 skos_definition ef:agent/enrich_references ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v8 ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v9
ef:activity/change/20260821T1302361922970000/244926 references ef:agent/enrich_references ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v9 ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v10
ef:activity/change/20260821T1302361922970000/256866 altLabel ef:agent/chebi_altlabels ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v10 ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v11
ef:activity/change/20260821T1302361922970000/261675 altLabel ef:agent/consensus_match ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v11 ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v12
ef:activity/change/20260821T1302361922970000/261676 cas_match_labels ef:agent/consensus_match ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v12 ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v13
ef:activity/change/20260821T1302361922970000/278642 properties ef:agent/opsin_iupac ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v13 ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v14
ef:activity/change/20260821T1302361922970000/285420 properties ef:agent/rdkit_post_consensus ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v14 ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v15
ef:activity/change/20260821T1302361922970000/291084 altLabel ef:agent/strip_catalogue_altlabels ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v15 ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v16
ef:activity/change/20260821T1302361922970000/311730 concept_associations ef:agent/carry_associations_onto_flows ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v16 ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v17
ef:activity/change/20260821T1302361922970000/393007 properties ef:agent/normalise_property_values ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v17 ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v18
ef:activity/change/20260821T1302361922970000/401755 types ef:agent/link_flows_to_their_substance ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v18 ef:flow/2587d88b-4ee9-4f9c-939e-2a464fcc10c1/v19

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