Thorium
Everything that changed this flow. Back to the flow
2618a9d8-662e-4e74-bbf4-8256a5e32bf8
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 3 | chebi_altlabels, consensus_match, dedupe_altlabels | Deduplicated altLabel values and removed entries matching prefLabel |
| prefLabel | 2 | bootstrap_labels, flow_layers.pubchem_element_enrichment | element name from the flow object: Thorium |
| cas_match_labels | 1 | consensus_match | group_key=thorium||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-29-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-1fe0b0d0552af544: {'7440-29-1': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| ec_numbers | 1 | ec_cross_check | Resolved from EC-inventory: 231-139-7 from CAS 7440-29-1 |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['7440-29-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33385']; candidate_pubchem_cids=[23960, 11817119]; selected_pubchem_cids=[23960]; formula_similarity_expected=['Th']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 19,153 | bootstrap_labels | prefLabel | — | [{"@value":"Thorium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | Bootstrapped prefLabel from legacy name field |
| 19,154 | bootstrap_labels | name | Thorium | — | Purged legacy name field to enforce prefLabel usage |
| 61,738 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Aircraft cruise height"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| 61,739 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-aicrhe | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| 219,587 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 227,036 | ec_cross_check | ec_numbers | [] | ["231-139-7"] | Resolved from EC-inventory: 231-139-7 from CAS 7440-29-1 |
| 245,014 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 245,015 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 245,016 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J261.499E","provenance":{"prov:wasGeneratedBy":"enrich_referen… | Added references with provenance; cas_numbers=['7440-29-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33385']; candidate_pubchem_cids=[23960, 11817119]; selected_pubchem_cids=[23960]; formula_similarity_expected=['Th']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 253,460 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | rdkit_pre_consensus from '[Th]'; added: monoisotopic_mass |
| 256,885 | chebi_altlabels | altLabel | [] | [{"@value":"90Th","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… | Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 272,632 | consensus_match | altLabel | [{"@value":"90Th","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… | [{"@value":"90Th","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… | group_key=thorium||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=7440-29-1; added Common Chemistry CAS names as altLabel: <sup>232</sup>Th, MeSH ID: D013910, Thorium-232; object_uuid=fo-1fe0b0d0552af544 |
| 272,633 | consensus_match | cas_match_labels | — | {"7440-29-1":"exactMatch"} | group_key=thorium||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-29-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-1fe0b0d0552af544: {'7440-29-1': 'exactMatch'} |
| 278,688 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Thorium' |
| 285,468 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | rdkit_post_consensus from '[Th]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 293,041 | dedupe_altlabels | altLabel | [{"@value":"90Th","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… | [{"@value":"90Th","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… | Deduplicated altLabel values and removed entries matching prefLabel |
| 311,908 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/2618a9d8-662e-… | associations resolved on the elementary layer |
| 393,057 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | typed the way the ontology types it |
| 401,817 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/ChemicalElement"] | the substance's answer, copied onto its flow |
| 401,818 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | the substance's answer, copied onto its flow |
| 403,842 | flow_layers.pubchem_element_enrichment | prefLabel | [{"@value":"Thorium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | [{"@value":"Thorium","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_enrichm… | element name from the flow object: Thorium |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T1416470405690000/19153 | prefLabel | ef:agent/bootstrap_labels | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v0 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v1 |
| ef:activity/change/20260820T1416470405690000/19154 | name | ef:agent/bootstrap_labels | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v1 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v2 |
| ef:activity/change/20260820T1416470405690000/61738 | context | ef:agent/default_context_mapping | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v2 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v3 |
| ef:activity/change/20260820T1416470405690000/61739 | context_iri | ef:agent/default_context_mapping | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v3 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v4 |
| ef:activity/change/20260820T1416470405690000/219587 | unit_iri | ef:agent/unit_normalization | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v4 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v5 |
| ef:activity/change/20260820T1416470405690000/227036 | ec_numbers | ef:agent/ec_cross_check | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v5 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v6 |
| ef:activity/change/20260820T1416470405690000/245014 | properties | ef:agent/enrich_references | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v6 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v7 |
| ef:activity/change/20260820T1416470405690000/245015 | skos_definition | ef:agent/enrich_references | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v7 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v8 |
| ef:activity/change/20260820T1416470405690000/245016 | references | ef:agent/enrich_references | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v8 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v9 |
| ef:activity/change/20260820T1416470405690000/253460 | properties | ef:agent/rdkit_pre_consensus | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v9 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v10 |
| ef:activity/change/20260820T1416470405690000/256885 | altLabel | ef:agent/chebi_altlabels | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v10 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v11 |
| ef:activity/change/20260820T1416470405690000/272632 | altLabel | ef:agent/consensus_match | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v11 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v12 |
| ef:activity/change/20260820T1416470405690000/272633 | cas_match_labels | ef:agent/consensus_match | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v12 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v13 |
| ef:activity/change/20260820T1416470405690000/278688 | properties | ef:agent/opsin_iupac | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v13 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v14 |
| ef:activity/change/20260820T1416470405690000/285468 | properties | ef:agent/rdkit_post_consensus | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v14 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v15 |
| ef:activity/change/20260820T1416470405690000/293041 | altLabel | ef:agent/dedupe_altlabels | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v15 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v16 |
| ef:activity/change/20260820T1416470405690000/311908 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v16 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v17 |
| ef:activity/change/20260820T1416470405690000/393057 | properties | ef:agent/normalise_property_values | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v17 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v18 |
| ef:activity/change/20260820T1416470405690000/401817 | types | ef:agent/link_flows_to_their_substance | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v18 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v19 |
| ef:activity/change/20260820T1416470405690000/401818 | properties | ef:agent/link_flows_to_their_substance | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v19 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v20 |
| ef:activity/change/20260820T1416470405690000/403842 | prefLabel | ef:agent/flow_layers.pubchem_element_enrichment | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v20 | ef:flow/2618a9d8-662e-4e74-bbf4-8256a5e32bf8/v21 |