Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, link_flows_to_their_substance, normalise_property_values, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
cas_match_labels 1 consensus_match group_key=3-[1-hydroxy-2-(methylamino)ethyl]phenol||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory']; cas_sources={'59-42-7': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-d976e7cd869fc04d: {'59-42-7': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['59-42-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_8093']; candidate_pubchem_cids=[4782, 6041, 71546, 5284443]; selected_pubchem_cids=[6041]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
13,876 bootstrap_labels prefLabel [{"@value":"3-[1-hydroxy-2-(methylamino)ethyl]phenol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_label… Bootstrapped prefLabel from legacy name field
13,877 bootstrap_labels name 3-[1-hydroxy-2-(methylamino)ethyl]phenol Purged legacy name field to enforce prefLabel usage
13,878 bootstrap_labels synonyms ["organic","phenylephrine"] [] Removed legacy synonyms field in favor of structured labels
62,504 default_context_mapping context {"dimension":"Environmental","media":"Air","indoor":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
62,505 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
217,923 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
240,323 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H13NO2"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
240,324 enrich_references skos_definition [{"@value":"A member of the class of the class of phenylethanolamines that is (1R)-2-(methylamino)-1-phenylethan-1-ol c… Merged ChEBI/PubChem definitions into skos:definition
240,325 enrich_references references [] [{"@id":"drugcentral:2146","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… Added references with provenance; cas_numbers=['59-42-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_8093']; candidate_pubchem_cids=[4782, 6041, 71546, 5284443]; selected_pubchem_cids=[6041]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,098 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H13NO2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H13NO2"]… rdkit_pre_consensus from 'CNCC(C1=CC(=CC=C1)O)O'; added: inchi2d_string, monoisotopic_mass
256,259 chebi_altlabels altLabel [] [{"@value":"(-)-m-hydroxy-alpha-(methylaminomethyl)benzyl alcohol","@language":"en","source":{"prov:wasGeneratedBy":"ch… Added 11 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
261,856 consensus_match altLabel [{"@value":"(-)-m-hydroxy-alpha-(methylaminomethyl)benzyl alcohol","@language":"en","source":{"prov:wasGeneratedBy":"ch… [{"@value":"(-)-m-hydroxy-alpha-(methylaminomethyl)benzyl alcohol","@language":"en","source":{"prov:wasGeneratedBy":"ch… group_key=3-[1-hydroxy-2-(methylamino)ethyl]phenol||dimension=Environmental > media=Water > water_body=Surface water; cas=59-42-7; added Common Chemistry CAS names as altLabel: (-)-<em>m</em>-Hydroxy-α-(methylaminomethyl)benzyl alcohol, (-)-<em>m</em>-Oxedrine, (-)-<em>m</em>-Synephrine, (-)-Phenylephrine, (<em>R</em>)-(-)-Phenylephrine, (<em>R</em>)-Phenylephrine, (R)-3-[1-Hydroxy-2-(methylamino)ethyl]phenol, (α<em>R</em>)-3-Hydroxy-α-[(methylamino)methyl]benzenemethanol, <em>R</em>(-)-Mezaton, <em>l</em>-<em>m</em>-Hydroxy-α-[(methylamino)methyl]benzyl alcohol, <em>l</em>-Phenylephrine, <em>m</em>-Methylaminoethanolphenol, <em>m</em>-Oxedrine, <em>m</em>-Sympathol, <em>m</em>-Sympatol, <em>m</em>-Synephrine, <span class="text-smallcaps">L</span>-Phenylephedrine, Benzenemethanol, 3-hydroxy-α-[(methylamino)methyl]-, (<em>R</em>)-, Benzenemethanol, 3-hydroxy-α-[(methylamino)methyl]-, (α<em>R</em>)-, Benzyl alcohol, <em>m</em>-hydroxy-α-[(methylamino)methyl]-, (-)-, Iriphrin, MeSH ID: D010656, Mesaton, Mesatone, Metaoxedrin, Metaoxedrine, Metasympatol, Metasynephrine, Mezaton, Neo-Synephrine, Relacon-HC, Visadron; object_uuid=fo-d976e7cd869fc04d
261,857 consensus_match cas_match_labels {"59-42-7":"exactMatch"} group_key=3-[1-hydroxy-2-(methylamino)ethyl]phenol||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory']; cas_sources={'59-42-7': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-d976e7cd869fc04d: {'59-42-7': 'exactMatch'}
283,964 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H13NO2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H13NO2"]… rdkit_post_consensus from 'CNCC(C1=CC(=CC=C1)O)O'; confirmed: smiles_string, inchi2d_string, molecular_formula, molecular_mass, monoisotopic_mass
292,717 dedupe_altlabels altLabel [{"@value":"(-)-m-hydroxy-alpha-(methylaminomethyl)benzyl alcohol","@language":"en","source":{"prov:wasGeneratedBy":"ch… [{"@value":"(-)-m-hydroxy-alpha-(methylaminomethyl)benzyl alcohol","@language":"en","source":{"prov:wasGeneratedBy":"ch… Deduplicated altLabel values and removed entries matching prefLabel
312,268 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/2773a68d-a77c-… associations resolved on the elementary layer
391,645 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H13NO2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H13NO2"]… typed the way the ontology types it
399,771 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
399,772 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H13NO2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H13NO2"]… the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1122181958110000/13876 prefLabel ef:agent/bootstrap_labels ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v0 ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v1
ef:activity/change/20260821T1122181958110000/13877 name ef:agent/bootstrap_labels ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v1 ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v2
ef:activity/change/20260821T1122181958110000/13878 synonyms ef:agent/bootstrap_labels ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v2 ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v3
ef:activity/change/20260821T1122181958110000/62504 context ef:agent/default_context_mapping ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v3 ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v4
ef:activity/change/20260821T1122181958110000/62505 context_iri ef:agent/default_context_mapping ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v4 ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v5
ef:activity/change/20260821T1122181958110000/217923 unit_iri ef:agent/unit_normalization ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v5 ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v6
ef:activity/change/20260821T1122181958110000/240323 properties ef:agent/enrich_references ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v6 ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v7
ef:activity/change/20260821T1122181958110000/240324 skos_definition ef:agent/enrich_references ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v7 ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v8
ef:activity/change/20260821T1122181958110000/240325 references ef:agent/enrich_references ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v8 ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v9
ef:activity/change/20260821T1122181958110000/252098 properties ef:agent/rdkit_pre_consensus ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v9 ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v10
ef:activity/change/20260821T1122181958110000/256259 altLabel ef:agent/chebi_altlabels ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v10 ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v11
ef:activity/change/20260821T1122181958110000/261856 altLabel ef:agent/consensus_match ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v11 ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v12
ef:activity/change/20260821T1122181958110000/261857 cas_match_labels ef:agent/consensus_match ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v12 ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v13
ef:activity/change/20260821T1122181958110000/283964 properties ef:agent/rdkit_post_consensus ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v13 ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v14
ef:activity/change/20260821T1122181958110000/292717 altLabel ef:agent/dedupe_altlabels ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v14 ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v15
ef:activity/change/20260821T1122181958110000/312268 concept_associations ef:agent/carry_associations_onto_flows ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v15 ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v16
ef:activity/change/20260821T1122181958110000/391645 properties ef:agent/normalise_property_values ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v16 ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v17
ef:activity/change/20260821T1122181958110000/399771 types ef:agent/link_flows_to_their_substance ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v17 ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v18
ef:activity/change/20260821T1122181958110000/399772 properties ef:agent/link_flows_to_their_substance ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v18 ef:flow/2773a68d-a77c-4ab3-a1bd-1549198a0e71/v19

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