Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 5 chebi_altlabels, consensus_match, strip_catalogue_altlabels, strip_cross_object_altlabels Removed 8 catalogue altLabel value(s): 'BF 9011' (grade code), 'HF 3050' (grade code), 'LX 300' (grade code), 'LX 300 (crosslinking agent)' (grade code), 'NSC 4765' (registry code), 'RA 238' (grade code), 'TM 1202' (grade code), 'YLH 023' (grade code)
prefLabel 4 bootstrap_labels, consensus_match, normalize_name_case, substance_label_v1 the substance's name: Acrylic Acid
cas_match_labels 1 consensus_match group_key=acrylate,ion||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'79-10-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b0f9149cb30b07db: {'79-10-7': 'exactMatch'}
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
dcterms_is_replaced_by 1 pipeline.deduplication duplicate of 08a91e70-3ddc-11dd-91a8-0050c2490048
is_replaced_by_uuid 1 pipeline.deduplication duplicate of 08a91e70-3ddc-11dd-91a8-0050c2490048
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
owl_deprecated 1 pipeline.deduplication duplicate of 08a91e70-3ddc-11dd-91a8-0050c2490048
references 1 enrich_references Added references with provenance; cas_numbers=['79-10-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_18308']; candidate_pubchem_cids=[6581, 25188, 19966351]; selected_pubchem_cids=[6581]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

26
# Step Field From To Why
12,303 bootstrap_labels prefLabel [{"@value":"Acrylate, ion","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… Bootstrapped prefLabel from legacy name field
12,304 bootstrap_labels name Acrylate, ion Purged legacy name field to enforce prefLabel usage
32,876 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
32,877 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
215,686 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,942 normalize_name_case prefLabel [{"@value":"Acrylate, ion","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… [{"@value":"Acrylate, Ion","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
233,921 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H4O2"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
233,922 enrich_references skos_definition [{"@value":"A α,β-unsaturated monocarboxylic acid that is ethene substituted by a carboxy group.","@language":"en","pro… Merged ChEBI/PubChem definitions into skos:definition
233,923 enrich_references references [] [{"@id":"gmelin:1817","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… Added references with provenance; cas_numbers=['79-10-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_18308']; candidate_pubchem_cids=[6581, 25188, 19966351]; selected_pubchem_cids=[6581]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,260 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H4O2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H4O2"],"… rdkit_pre_consensus from 'C=CC(=O)O'; added: monoisotopic_mass
256,069 chebi_altlabels altLabel [] [{"@value":"2-Propenoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… Added 10 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
257,446 strip_cross_object_altlabels altLabel [{"@value":"2-Propenoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… [{"@value":"2-Propenoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… Removed 1 altLabel value(s) that duplicate another flow object's prefLabel: 'ACRYLIC ACID'
263,550 consensus_match prefLabel [{"@value":"Acrylate, Ion","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… [{"@value":"Acrylic acid","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"co… cas=79-10-7; cc_chebi_agreed_name='Acrylic acid'; object_uuid=fo-b0f9149cb30b07db
263,551 consensus_match altLabel [{"@value":"2-Propenoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… [{"@value":"2-Propenoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… cas=79-10-7; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-b0f9149cb30b07db
263,553 consensus_match altLabel [{"@value":"2-Propenoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… [{"@value":"2-Propenoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… group_key=acrylate,ion||dimension=Environmental > media=Water > water_body=Surface water; cas=79-10-7; added Common Chemistry CAS names as altLabel: 2-Propenoic acid, polymer with graphene, graft, Acrylic Acid Glacial, B 60-1, BF 9011, HF 3050, LX 300, LX 300 (crosslinking agent), Liroudan FR-RV, NSC 4765, RA 238, Relugan FR-RV, TM 1202, YLH 023; object_uuid=fo-b0f9149cb30b07db
263,554 consensus_match cas_match_labels {"79-10-7":"exactMatch"} group_key=acrylate,ion||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'79-10-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b0f9149cb30b07db: {'79-10-7': 'exactMatch'}
276,857 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H4O2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H4O2"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Acrylic acid'
283,503 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H4O2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H4O2"],"… rdkit_post_consensus from 'C=CC(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,788 strip_catalogue_altlabels altLabel [{"@value":"2-Propenoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… [{"@value":"2-Propenoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… Removed 8 catalogue altLabel value(s): 'BF 9011' (grade code), 'HF 3050' (grade code), 'LX 300' (grade code), 'LX 300 (crosslinking agent)' (grade code), 'NSC 4765' (registry code), 'RA 238' (grade code), 'TM 1202' (grade code), 'YLH 023' (grade code)
293,390 pipeline.deduplication owl_deprecated yes duplicate of 08a91e70-3ddc-11dd-91a8-0050c2490048
293,391 pipeline.deduplication dcterms_is_replaced_by urn:uuid:08a91e70-3ddc-11dd-91a8-0050c2490048 duplicate of 08a91e70-3ddc-11dd-91a8-0050c2490048
293,392 pipeline.deduplication is_replaced_by_uuid 08a91e70-3ddc-11dd-91a8-0050c2490048 duplicate of 08a91e70-3ddc-11dd-91a8-0050c2490048
391,216 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H4O2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H4O2"],"… typed the way the ontology types it
396,979 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
399,150 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H4O2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H4O2"],"… the substance's answer, copied onto its flow
403,902 substance_label_v1 prefLabel [{"@value":"Acrylic acid","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"co… [{"@value":"Acrylic Acid","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"substance_label_v1","prov:wasA… the substance's name: Acrylic Acid

PROV-O trail

26 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/12303 prefLabel ef:agent/bootstrap_labels ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v0 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v1
ef:activity/change/20260821T1554374006150000/12304 name ef:agent/bootstrap_labels ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v1 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v2
ef:activity/change/20260821T1554374006150000/32876 context ef:agent/default_context_mapping ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v2 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v3
ef:activity/change/20260821T1554374006150000/32877 context_iri ef:agent/default_context_mapping ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v3 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v4
ef:activity/change/20260821T1554374006150000/215686 unit_iri ef:agent/unit_normalization ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v4 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v5
ef:activity/change/20260821T1554374006150000/223942 prefLabel ef:agent/normalize_name_case ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v5 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v6
ef:activity/change/20260821T1554374006150000/233921 properties ef:agent/enrich_references ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v6 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v7
ef:activity/change/20260821T1554374006150000/233922 skos_definition ef:agent/enrich_references ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v7 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v8
ef:activity/change/20260821T1554374006150000/233923 references ef:agent/enrich_references ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v8 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v9
ef:activity/change/20260821T1554374006150000/250260 properties ef:agent/rdkit_pre_consensus ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v9 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v10
ef:activity/change/20260821T1554374006150000/256069 altLabel ef:agent/chebi_altlabels ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v10 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v11
ef:activity/change/20260821T1554374006150000/257446 altLabel ef:agent/strip_cross_object_altlabels ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v11 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v12
ef:activity/change/20260821T1554374006150000/263550 prefLabel ef:agent/consensus_match ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v12 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v13
ef:activity/change/20260821T1554374006150000/263551 altLabel ef:agent/consensus_match ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v13 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v14
ef:activity/change/20260821T1554374006150000/263553 altLabel ef:agent/consensus_match ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v14 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v15
ef:activity/change/20260821T1554374006150000/263554 cas_match_labels ef:agent/consensus_match ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v15 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v16
ef:activity/change/20260821T1554374006150000/276857 properties ef:agent/opsin_iupac ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v16 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v17
ef:activity/change/20260821T1554374006150000/283503 properties ef:agent/rdkit_post_consensus ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v17 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v18
ef:activity/change/20260821T1554374006150000/289788 altLabel ef:agent/strip_catalogue_altlabels ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v18 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v19
ef:activity/change/20260821T1554374006150000/293390 owl_deprecated ef:agent/pipeline.deduplication ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v19 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v20
ef:activity/change/20260821T1554374006150000/293391 dcterms_is_replaced_by ef:agent/pipeline.deduplication ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v20 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v21
ef:activity/change/20260821T1554374006150000/293392 is_replaced_by_uuid ef:agent/pipeline.deduplication ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v21 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v22
ef:activity/change/20260821T1554374006150000/391216 properties ef:agent/normalise_property_values ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v22 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v23
ef:activity/change/20260821T1554374006150000/396979 types ef:agent/link_flows_to_their_substance ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v23 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v24
ef:activity/change/20260821T1554374006150000/399150 properties ef:agent/link_flows_to_their_substance ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v24 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v25
ef:activity/change/20260821T1554374006150000/403902 prefLabel ef:agent/substance_label_v1 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v25 ef:flow/27bc8be0-0b3b-4938-bd70-ae8b53add9d5/v26

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