Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 12 catalogue altLabel value(s): 'E 1010W' (grade code), 'HPS 3000' (grade code), 'IG 0218A' (grade code), 'MPP 030' (grade code), 'MPP 050' (grade code), 'MPP 080' (grade code), 'O 345' (grade code), 'P 50' (grade code), 'P 50 (metal)' (grade code), 'Palladex 600' (trade name), 'SFP 1001P' (grade code), 'TCP 211' (grade code)
prefLabel 3 bootstrap_labels, flow_layers.pubchem_element_enrichment, normalize_name_case element name from the flow object: Palladium
cas_match_labels 1 consensus_match group_key=palladium||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-05-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-44e37077dc0e6059: {'7440-05-3': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 231-115-6 from CAS 7440-05-3
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7440-05-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33363']; candidate_pubchem_cids=[23938, 82930, 12000666, 16211661, 16212676]; selected_pubchem_cids=[23938]; formula_similarity_expected=['Pd']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

23
# Step Field From To Why
8,872 bootstrap_labels prefLabel [{"@value":"palladium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Bootstrapped prefLabel from legacy name field
8,873 bootstrap_labels name palladium Purged legacy name field to enforce prefLabel usage
8,874 bootstrap_labels synonyms ["(107pd)palladium","(109pd)palladium","46Pd","AB1002191","AC1L2N3K","Escat(TM) 103","Escat(TM) 11","FT-0083594","IN284… [] Removed legacy synonyms field in favor of structured labels
63,492 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
63,493 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-noag Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
216,297 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,192 normalize_name_case prefLabel [{"@value":"palladium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… [{"@value":"Palladium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
226,916 ec_cross_check ec_numbers [] ["231-115-6"] Resolved from EC-inventory: 231-115-6 from CAS 7440-05-3
235,675 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pd"],"atte… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
235,676 enrich_references skos_definition [{"@value":"Chemical element (nickel group element atom) with atomic number 46.","@language":"en","provenance":{"prov:w… Merged ChEBI/PubChem definitions into skos:definition
235,677 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J1.387.572C","provenance":{"prov:wasGeneratedBy":"enrich_refer… Added references with provenance; cas_numbers=['7440-05-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33363']; candidate_pubchem_cids=[23938, 82930, 12000666, 16211661, 16212676]; selected_pubchem_cids=[23938]; formula_similarity_expected=['Pd']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,763 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pd"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pd"],"atte… rdkit_pre_consensus from '[Pd]'; added: monoisotopic_mass
255,657 chebi_altlabels altLabel [] [{"@value":"46Pd","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
270,366 consensus_match altLabel [{"@value":"46Pd","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"46Pd","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… group_key=palladium||dimension=Environmental > media=Air > strata=Unknown; cas=7440-05-3; added Common Chemistry CAS names as altLabel: E 1010W, HPS 3000, IG 0218A, MPP 030, MPP 050, MPP 080, MeSH ID: D010165, O 345, P 50, P 50 (metal), Palladex 600, Palladium (nanoparticles), Palladium (powder), Palladium black, Palladium element, Pd 0343251, SFP 1001P, TCP 211; object_uuid=fo-44e37077dc0e6059
270,367 consensus_match cas_match_labels {"7440-05-3":"exactMatch"} group_key=palladium||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-05-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-44e37077dc0e6059: {'7440-05-3': 'exactMatch'}
275,953 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pd"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pd"],"atte… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Palladium'
282,521 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pd"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pd"],"atte… rdkit_post_consensus from '[Pd]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,129 strip_catalogue_altlabels altLabel [{"@value":"46Pd","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"46Pd","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Removed 12 catalogue altLabel value(s): 'E 1010W' (grade code), 'HPS 3000' (grade code), 'IG 0218A' (grade code), 'MPP 030' (grade code), 'MPP 050' (grade code), 'MPP 080' (grade code), 'O 345' (grade code), 'P 50' (grade code), 'P 50 (metal)' (grade code), 'Palladex 600' (trade name), 'SFP 1001P' (grade code), 'TCP 211' (grade code)
312,786 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/2905510e-6556-… associations resolved on the elementary layer
390,303 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pd"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pd"],"atte… typed the way the ontology types it
397,847 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalElement"] the substance's answer, copied onto its flow
397,848 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pd"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Pd"],"atte… the substance's answer, copied onto its flow
403,824 flow_layers.pubchem_element_enrichment prefLabel [{"@value":"Palladium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… [{"@value":"Palladium","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_enric… element name from the flow object: Palladium

PROV-O trail

23 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1555490862250000/8872 prefLabel ef:agent/bootstrap_labels ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v0 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v1
ef:activity/change/20260820T1555490862250000/8873 name ef:agent/bootstrap_labels ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v1 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v2
ef:activity/change/20260820T1555490862250000/8874 synonyms ef:agent/bootstrap_labels ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v2 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v3
ef:activity/change/20260820T1555490862250000/63492 context ef:agent/default_context_mapping ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v3 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v4
ef:activity/change/20260820T1555490862250000/63493 context_iri ef:agent/default_context_mapping ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v4 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v5
ef:activity/change/20260820T1555490862250000/216297 unit_iri ef:agent/unit_normalization ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v5 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v6
ef:activity/change/20260820T1555490862250000/223192 prefLabel ef:agent/normalize_name_case ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v6 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v7
ef:activity/change/20260820T1555490862250000/226916 ec_numbers ef:agent/ec_cross_check ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v7 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v8
ef:activity/change/20260820T1555490862250000/235675 properties ef:agent/enrich_references ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v8 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v9
ef:activity/change/20260820T1555490862250000/235676 skos_definition ef:agent/enrich_references ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v9 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v10
ef:activity/change/20260820T1555490862250000/235677 references ef:agent/enrich_references ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v10 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v11
ef:activity/change/20260820T1555490862250000/250763 properties ef:agent/rdkit_pre_consensus ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v11 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v12
ef:activity/change/20260820T1555490862250000/255657 altLabel ef:agent/chebi_altlabels ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v12 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v13
ef:activity/change/20260820T1555490862250000/270366 altLabel ef:agent/consensus_match ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v13 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v14
ef:activity/change/20260820T1555490862250000/270367 cas_match_labels ef:agent/consensus_match ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v14 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v15
ef:activity/change/20260820T1555490862250000/275953 properties ef:agent/opsin_iupac ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v15 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v16
ef:activity/change/20260820T1555490862250000/282521 properties ef:agent/rdkit_post_consensus ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v16 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v17
ef:activity/change/20260820T1555490862250000/289129 altLabel ef:agent/strip_catalogue_altlabels ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v17 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v18
ef:activity/change/20260820T1555490862250000/312786 concept_associations ef:agent/carry_associations_onto_flows ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v18 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v19
ef:activity/change/20260820T1555490862250000/390303 properties ef:agent/normalise_property_values ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v19 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v20
ef:activity/change/20260820T1555490862250000/397847 types ef:agent/link_flows_to_their_substance ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v20 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v21
ef:activity/change/20260820T1555490862250000/397848 properties ef:agent/link_flows_to_their_substance ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v21 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v22
ef:activity/change/20260820T1555490862250000/403824 prefLabel ef:agent/flow_layers.pubchem_element_enrichment ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v22 ef:flow/2905510e-6556-11dd-ad8b-0800200c9a66/v23

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