Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'E 939' (grade code), 'E-939' (grade code)
prefLabel 3 bootstrap_labels, flow_layers.pubchem_element_enrichment, normalize_name_case element name from the flow object: Helium
cas_match_labels 1 consensus_match group_key=helium||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-59-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5a8a2277f9470ee9: {'7440-59-7': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 231-168-5 from CAS 7440-59-7
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7440-59-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30217', 'http://purl.obolibrary.org/obo/CHEBI_33681']; candidate_pubchem_cids=[23987]; selected_pubchem_cids=[23987]; formula_similarity_expected=['He']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

23
# Step Field From To Why
7,446 bootstrap_labels prefLabel [{"@value":"helium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… Bootstrapped prefLabel from legacy name field
7,447 bootstrap_labels name helium Purged legacy name field to enforce prefLabel usage
7,448 bootstrap_labels synonyms ["(3He)helium","3He","AC1L2N4R","Atomic helium","He","Helium, isotope of mass 3","Helium-4","O-Helium","[He]","helio","… [] Removed legacy synonyms field in favor of structured labels
63,704 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Aircraft cruise height"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
63,705 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-aicrhe Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
215,830 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,827 normalize_name_case prefLabel [{"@value":"helium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… [{"@value":"Helium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
226,828 ec_cross_check ec_numbers [] ["231-168-5"] Resolved from EC-inventory: 231-168-5 from CAS 7440-59-7
234,316 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["He"],"atte… Added ChEBI/PubChem properties (chebi_ids=2, pubchem_cids=1)
234,317 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
234,318 enrich_references references [] [{"@id":"drugcentral:4262","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… Added references with provenance; cas_numbers=['7440-59-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30217', 'http://purl.obolibrary.org/obo/CHEBI_33681']; candidate_pubchem_cids=[23987]; selected_pubchem_cids=[23987]; formula_similarity_expected=['He']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,377 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["He"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["He"],"atte… rdkit_pre_consensus from '[He]'; added: monoisotopic_mass
255,369 chebi_altlabels altLabel [] [{"@value":"2He","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… Added 9 ChEBI synonym(s) as altLabel from 2 linked ChEBI record(s)
267,576 consensus_match altLabel [{"@value":"2He","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… [{"@value":"2He","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… group_key=helium||dimension=Environmental > media=Air > strata=Unknown; cas=7440-59-7; added Common Chemistry CAS names as altLabel: <em>o</em>-Helium, <em>p</em>-Helium, Helium-4, MeSH ID: D006371; object_uuid=fo-5a8a2277f9470ee9
267,577 consensus_match cas_match_labels {"7440-59-7":"exactMatch"} group_key=helium||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-59-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5a8a2277f9470ee9: {'7440-59-7': 'exactMatch'}
275,549 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["He"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["He"],"atte… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Helium'
282,069 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["He"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["He"],"atte… rdkit_post_consensus from '[He]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,811 strip_catalogue_altlabels altLabel [{"@value":"2He","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… [{"@value":"2He","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… Removed 2 catalogue altLabel value(s): 'E 939' (grade code), 'E-939' (grade code)
312,890 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/29059f3f-6556-… associations resolved on the elementary layer
389,862 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["He"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["He"],"atte… typed the way the ontology types it
397,209 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalElement"] the substance's answer, copied onto its flow
397,210 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["He"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["He"],"atte… the substance's answer, copied onto its flow
403,799 flow_layers.pubchem_element_enrichment prefLabel [{"@value":"Helium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… [{"@value":"Helium","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_enrichme… element name from the flow object: Helium

PROV-O trail

23 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/7446 prefLabel ef:agent/bootstrap_labels ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v0 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v1
ef:activity/change/20260820T0738569779880000/7447 name ef:agent/bootstrap_labels ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v1 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v2
ef:activity/change/20260820T0738569779880000/7448 synonyms ef:agent/bootstrap_labels ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v2 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v3
ef:activity/change/20260820T0738569779880000/63704 context ef:agent/default_context_mapping ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v3 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v4
ef:activity/change/20260820T0738569779880000/63705 context_iri ef:agent/default_context_mapping ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v4 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v5
ef:activity/change/20260820T0738569779880000/215830 unit_iri ef:agent/unit_normalization ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v5 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v6
ef:activity/change/20260820T0738569779880000/222827 prefLabel ef:agent/normalize_name_case ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v6 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v7
ef:activity/change/20260820T0738569779880000/226828 ec_numbers ef:agent/ec_cross_check ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v7 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v8
ef:activity/change/20260820T0738569779880000/234316 properties ef:agent/enrich_references ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v8 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v9
ef:activity/change/20260820T0738569779880000/234317 skos_definition ef:agent/enrich_references ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v9 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v10
ef:activity/change/20260820T0738569779880000/234318 references ef:agent/enrich_references ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v10 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v11
ef:activity/change/20260820T0738569779880000/250377 properties ef:agent/rdkit_pre_consensus ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v11 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v12
ef:activity/change/20260820T0738569779880000/255369 altLabel ef:agent/chebi_altlabels ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v12 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v13
ef:activity/change/20260820T0738569779880000/267576 altLabel ef:agent/consensus_match ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v13 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v14
ef:activity/change/20260820T0738569779880000/267577 cas_match_labels ef:agent/consensus_match ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v14 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v15
ef:activity/change/20260820T0738569779880000/275549 properties ef:agent/opsin_iupac ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v15 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v16
ef:activity/change/20260820T0738569779880000/282069 properties ef:agent/rdkit_post_consensus ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v16 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v17
ef:activity/change/20260820T0738569779880000/288811 altLabel ef:agent/strip_catalogue_altlabels ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v17 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v18
ef:activity/change/20260820T0738569779880000/312890 concept_associations ef:agent/carry_associations_onto_flows ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v18 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v19
ef:activity/change/20260820T0738569779880000/389862 properties ef:agent/normalise_property_values ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v19 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v20
ef:activity/change/20260820T0738569779880000/397209 types ef:agent/link_flows_to_their_substance ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v20 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v21
ef:activity/change/20260820T0738569779880000/397210 properties ef:agent/link_flows_to_their_substance ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v21 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v22
ef:activity/change/20260820T0738569779880000/403799 prefLabel ef:agent/flow_layers.pubchem_element_enrichment ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v22 ef:flow/29059f3f-6556-11dd-ad8b-0800200c9a66/v23

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