Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 4 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, consensus_match cas=7785-26-4; cc_chebi_agreed_name='(-)-α-Pinene'; object_uuid=fo-edcb666137504bfc
cas_match_labels 1 consensus_match group_key=(1s)-(-)-alpha-pinene||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory']; cas_sources={'7785-26-4': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-edcb666137504bfc: {'7785-26-4': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7785-26-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28660']; candidate_pubchem_cids=[6654, 82227, 440968, 12172380, 12223112]; selected_pubchem_cids=[440968]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
19,636 bootstrap_labels prefLabel [{"@value":"(1s)-(-)-alpha-pinene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… Bootstrapped prefLabel from legacy name field
19,637 bootstrap_labels name (1s)-(-)-alpha-pinene Purged legacy name field to enforce prefLabel usage
19,639 bootstrap_labels synonyms ["( )-2-Pinene","( )-alpha-Pinene","(+-)-2-pinene","(+-)-alpha-pinene","(-)-Pin-2(3)-ene","(1R)-(+)-a-Pinene","(1R)-2,6… [] Removed legacy synonyms field in favor of structured labels
63,946 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
63,947 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
219,730 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
245,416 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
245,417 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
245,418 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J95.400D","provenance":{"prov:wasGeneratedBy":"enrich_referenc… Added references with provenance; cas_numbers=['7785-26-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28660']; candidate_pubchem_cids=[6654, 82227, 440968, 12172380, 12223112]; selected_pubchem_cids=[440968]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
253,581 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… rdkit_pre_consensus from 'CC1=CCC2CC1C2(C)C'; added: inchi2d_string, monoisotopic_mass
256,939 chebi_altlabels altLabel [] [{"@value":"(-)-alpha-Pinene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
257,577 consensus_match prefLabel [{"@value":"(1s)-(-)-alpha-pinene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… [{"@value":"(-)-α-Pinene","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"co… cas=7785-26-4; cc_chebi_agreed_name='(-)-α-Pinene'; object_uuid=fo-edcb666137504bfc
257,578 consensus_match altLabel [{"@value":"(-)-alpha-Pinene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… [{"@value":"(-)-alpha-Pinene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… cas=7785-26-4; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-edcb666137504bfc
257,579 consensus_match altLabel [{"@value":"(-)-alpha-Pinene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… [{"@value":"(-)-alpha-Pinene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… group_key=(1s)-(-)-alpha-pinene||dimension=Environmental > media=Ground > geography=Agricultural; cas=7785-26-4; added Common Chemistry CAS names as altLabel: (-)-(1<em>S</em>)-α-Pinene, (-)-2-Pinene, (1<em>S</em>)-(-)-α-Pinene, (1<em>S</em>,5<em>S</em>)-(-)-α-Pinene, (<em>S</em>)-(-)-Pinene, (<em>S</em>)-(-)-α-Pinene, 1<em>S</em>-α-Pinene, 2-Pinene, (1<em>S</em>,5<em>S</em>)-(-)-, <em>l</em>-α-Pinene, Bicyclo[3.1.1]hept-2-ene, 2,6,6-trimethyl-, (1<em>S</em>)-, Bicyclo[3.1.1]hept-2-ene, 2,6,6-trimethyl-, (1<em>S</em>,5<em>S</em>)-; object_uuid=fo-edcb666137504bfc
257,580 consensus_match cas_match_labels {"7785-26-4":"exactMatch"} group_key=(1s)-(-)-alpha-pinene||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory']; cas_sources={'7785-26-4': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-edcb666137504bfc: {'7785-26-4': 'exactMatch'}
278,815 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(-)-α-Pinene'
285,600 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… rdkit_post_consensus from 'CC1=CC[C@H]2C[C@@H]1C2(C)C'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
293,070 dedupe_altlabels altLabel [{"@value":"(-)-alpha-Pinene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… [{"@value":"(-)-alpha-Pinene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… Deduplicated altLabel values and removed entries matching prefLabel
313,011 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/29061446-6556-… associations resolved on the elementary layer
393,180 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… typed the way the ontology types it
402,001 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
402,002 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/19636 prefLabel ef:agent/bootstrap_labels ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v0 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v1
ef:activity/change/20260820T0738569779880000/19637 name ef:agent/bootstrap_labels ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v1 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v2
ef:activity/change/20260820T0738569779880000/19639 synonyms ef:agent/bootstrap_labels ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v2 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v3
ef:activity/change/20260820T0738569779880000/63946 context ef:agent/default_context_mapping ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v3 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v4
ef:activity/change/20260820T0738569779880000/63947 context_iri ef:agent/default_context_mapping ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v4 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v5
ef:activity/change/20260820T0738569779880000/219730 unit_iri ef:agent/unit_normalization ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v5 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v6
ef:activity/change/20260820T0738569779880000/245416 properties ef:agent/enrich_references ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v6 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v7
ef:activity/change/20260820T0738569779880000/245417 skos_definition ef:agent/enrich_references ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v7 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v8
ef:activity/change/20260820T0738569779880000/245418 references ef:agent/enrich_references ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v8 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v9
ef:activity/change/20260820T0738569779880000/253581 properties ef:agent/rdkit_pre_consensus ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v9 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v10
ef:activity/change/20260820T0738569779880000/256939 altLabel ef:agent/chebi_altlabels ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v10 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v11
ef:activity/change/20260820T0738569779880000/257577 prefLabel ef:agent/consensus_match ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v11 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v12
ef:activity/change/20260820T0738569779880000/257578 altLabel ef:agent/consensus_match ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v12 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v13
ef:activity/change/20260820T0738569779880000/257579 altLabel ef:agent/consensus_match ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v13 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v14
ef:activity/change/20260820T0738569779880000/257580 cas_match_labels ef:agent/consensus_match ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v14 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v15
ef:activity/change/20260820T0738569779880000/278815 properties ef:agent/opsin_iupac ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v15 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v16
ef:activity/change/20260820T0738569779880000/285600 properties ef:agent/rdkit_post_consensus ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v16 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v17
ef:activity/change/20260820T0738569779880000/293070 altLabel ef:agent/dedupe_altlabels ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v17 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v18
ef:activity/change/20260820T0738569779880000/313011 concept_associations ef:agent/carry_associations_onto_flows ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v18 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v19
ef:activity/change/20260820T0738569779880000/393180 properties ef:agent/normalise_property_values ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v19 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v20
ef:activity/change/20260820T0738569779880000/402001 types ef:agent/link_flows_to_their_substance ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v20 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v21
ef:activity/change/20260820T0738569779880000/402002 properties ef:agent/link_flows_to_their_substance ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v21 ef:flow/29061446-6556-11dd-ad8b-0800200c9a66/v22

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