Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'OHM 11771' (grade code)
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=10102-43-9; cc_chebi_agreed_name='Nitric oxide'; object_uuid=fo-c5b8d066a120d5fe
cas_match_labels 1 consensus_match group_key=nitrogenmonoxide||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'10102-43-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-c5b8d066a120d5fe: {'10102-43-9': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 233-271-0 from CAS 10102-43-9
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['10102-43-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16480']; candidate_pubchem_cids=[945, 145068]; selected_pubchem_cids=[145068]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

23
# Step Field From To Why
7,824 bootstrap_labels prefLabel [{"@value":"nitrogen monoxide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… Bootstrapped prefLabel from legacy name field
7,825 bootstrap_labels name nitrogen monoxide Purged legacy name field to enforce prefLabel usage
7,826 bootstrap_labels synonyms ["AC1L1ADQ","AC1Q6QZ0","Bioxyde d'azote","HNO","NITRIC-OXIDE","Nitrogen oxide (NO)","Nitrosyl hydride","Nitrosyl hydrid… [] Removed legacy synonyms field in favor of structured labels
64,134 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
64,135 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
215,950 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,931 normalize_name_case prefLabel [{"@value":"nitrogen monoxide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… [{"@value":"Nitrogen Monoxide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
226,853 ec_cross_check ec_numbers [] ["233-271-0"] Resolved from EC-inventory: 233-271-0 from CAS 10102-43-9
234,669 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["NO"],"atte… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
234,670 enrich_references skos_definition [{"@value":"A nitrogen oxide which is a free radical, each molecule of which consists of one nitrogen and one oxygen at… Merged ChEBI/PubChem definitions into skos:definition
234,671 enrich_references references [] [{"@id":"gmelin:451","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"consen… Added references with provenance; cas_numbers=['10102-43-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16480']; candidate_pubchem_cids=[945, 145068]; selected_pubchem_cids=[145068]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,465 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["NO"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["NO"],"atte… rdkit_pre_consensus from '[N]=O'; added: monoisotopic_mass
255,445 chebi_altlabels altLabel [] [{"@value":"(.)NO","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… Added 22 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
269,901 consensus_match prefLabel [{"@value":"Nitrogen Monoxide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… [{"@value":"Nitric oxide","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"co… cas=10102-43-9; cc_chebi_agreed_name='Nitric oxide'; object_uuid=fo-c5b8d066a120d5fe
269,902 consensus_match altLabel [{"@value":"(.)NO","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… [{"@value":"(.)NO","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… cas=10102-43-9; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-c5b8d066a120d5fe
269,903 consensus_match altLabel [{"@value":"(.)NO","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… [{"@value":"(.)NO","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… group_key=nitrogenmonoxide||dimension=Environmental > media=Air > strata=Unknown; cas=10102-43-9; added Common Chemistry CAS names as altLabel: Amidogen, oxo-, Genosyl, INOmax, INOvent, MeSH ID: D009569, Nitric oxide (NO), Nitric oxide trimer, Nitrogen oxide (N<sub>4</sub>O<sub>4</sub>), Nitrogen oxide (NO), Nitrogen(II) oxide, Nitrosyl radical, OHM 11771, R-107; object_uuid=fo-c5b8d066a120d5fe
269,904 consensus_match cas_match_labels {"10102-43-9":"exactMatch"} group_key=nitrogenmonoxide||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'10102-43-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-c5b8d066a120d5fe: {'10102-43-9': 'exactMatch'}
275,631 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["NO"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["NO"],"atte… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'mononitrogen monoxide'
282,170 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["NO"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["NO"],"atte… rdkit_post_consensus from '[N]=O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,864 strip_catalogue_altlabels altLabel [{"@value":"(.)NO","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… [{"@value":"(.)NO","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… Removed 1 catalogue altLabel value(s): 'OHM 11771' (grade code)
313,085 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/29063b7e-6556-… associations resolved on the elementary layer
389,958 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["NO"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["NO"],"atte… typed the way the ontology types it
397,363 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

23 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/7824 prefLabel ef:agent/bootstrap_labels ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v0 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v1
ef:activity/change/20260822T0600486828500000/7825 name ef:agent/bootstrap_labels ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v1 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v2
ef:activity/change/20260822T0600486828500000/7826 synonyms ef:agent/bootstrap_labels ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v2 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v3
ef:activity/change/20260822T0600486828500000/64134 context ef:agent/default_context_mapping ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v3 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v4
ef:activity/change/20260822T0600486828500000/64135 context_iri ef:agent/default_context_mapping ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v4 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v5
ef:activity/change/20260822T0600486828500000/215950 unit_iri ef:agent/unit_normalization ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v5 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v6
ef:activity/change/20260822T0600486828500000/222931 prefLabel ef:agent/normalize_name_case ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v6 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v7
ef:activity/change/20260822T0600486828500000/226853 ec_numbers ef:agent/ec_cross_check ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v7 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v8
ef:activity/change/20260822T0600486828500000/234669 properties ef:agent/enrich_references ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v8 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v9
ef:activity/change/20260822T0600486828500000/234670 skos_definition ef:agent/enrich_references ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v9 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v10
ef:activity/change/20260822T0600486828500000/234671 references ef:agent/enrich_references ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v10 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v11
ef:activity/change/20260822T0600486828500000/250465 properties ef:agent/rdkit_pre_consensus ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v11 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v12
ef:activity/change/20260822T0600486828500000/255445 altLabel ef:agent/chebi_altlabels ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v12 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v13
ef:activity/change/20260822T0600486828500000/269901 prefLabel ef:agent/consensus_match ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v13 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v14
ef:activity/change/20260822T0600486828500000/269902 altLabel ef:agent/consensus_match ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v14 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v15
ef:activity/change/20260822T0600486828500000/269903 altLabel ef:agent/consensus_match ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v15 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v16
ef:activity/change/20260822T0600486828500000/269904 cas_match_labels ef:agent/consensus_match ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v16 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v17
ef:activity/change/20260822T0600486828500000/275631 properties ef:agent/opsin_iupac ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v17 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v18
ef:activity/change/20260822T0600486828500000/282170 properties ef:agent/rdkit_post_consensus ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v18 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v19
ef:activity/change/20260822T0600486828500000/288864 altLabel ef:agent/strip_catalogue_altlabels ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v19 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v20
ef:activity/change/20260822T0600486828500000/313085 concept_associations ef:agent/carry_associations_onto_flows ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v20 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v21
ef:activity/change/20260822T0600486828500000/389958 properties ef:agent/normalise_property_values ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v21 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v22
ef:activity/change/20260822T0600486828500000/397363 types ef:agent/link_flows_to_their_substance ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v22 ef:flow/29063b7e-6556-11dd-ad8b-0800200c9a66/v23

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