Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
cas_match_labels 1 consensus_match group_key=3-carene||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'13466-78-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-803f38a962dd128f: {'13466-78-9': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 236-719-3 from CAS 13466-78-9
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['13466-78-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_35661']; candidate_pubchem_cids=[26049, 442461, 443156, 14568304]; selected_pubchem_cids=[26049]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
19,704 bootstrap_labels prefLabel [{"@value":"3-carene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Bootstrapped prefLabel from legacy name field
19,705 bootstrap_labels name 3-carene Purged legacy name field to enforce prefLabel usage
19,706 bootstrap_labels synonyms ["(+)Car-3-ene","(+-)-3-Carene","(+-)-delta3-Carene","3,7,7(or 4,7,7)-Trimethylbicyclo(4.1.0)hept-3-ene","3,7,7-Trimeth… [] Removed legacy synonyms field in favor of structured labels
64,316 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Ocean"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
64,317 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-ocea Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
219,745 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
227,042 ec_cross_check ec_numbers [] ["236-719-3"] Resolved from EC-inventory: 236-719-3 from CAS 13466-78-9
245,467 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
245,468 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
245,469 enrich_references references [] [{"@id":"beilstein:1902766","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['13466-78-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_35661']; candidate_pubchem_cids=[26049, 442461, 443156, 14568304]; selected_pubchem_cids=[26049]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
253,588 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… rdkit_pre_consensus from 'CC1=CCC2C(C1)C2(C)C'; added: monoisotopic_mass
256,943 chebi_altlabels altLabel [] [{"@value":"3,7,7-trimethylbicyclo[4.1.0]hept-3-ene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels"… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
261,940 consensus_match altLabel [{"@value":"3,7,7-trimethylbicyclo[4.1.0]hept-3-ene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels"… [{"@value":"3,7,7-trimethylbicyclo[4.1.0]hept-3-ene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels"… group_key=3-carene||dimension=Environmental > media=Ground > geography=Agricultural; cas=13466-78-9; added Common Chemistry CAS names as altLabel: (±)-3-Carene, (±)-Δ<sup>3</sup>-Carene, Bicyclo[4.1.0]hept-3-ene, 3,7,7-trimethyl-, Δ<sup>3</sup>-Carene, δ-3-Carene; object_uuid=fo-803f38a962dd128f
261,941 consensus_match cas_match_labels {"13466-78-9":"exactMatch"} group_key=3-carene||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'13466-78-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-803f38a962dd128f: {'13466-78-9': 'exactMatch'}
278,808 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '3-carene'
285,598 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… rdkit_post_consensus from 'CC1=CCC2C(C1)C2(C)C'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
293,050 dedupe_altlabels altLabel [{"@value":"3,7,7-trimethylbicyclo[4.1.0]hept-3-ene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels"… [{"@value":"3,7,7-trimethylbicyclo[4.1.0]hept-3-ene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels"… Deduplicated altLabel values and removed entries matching prefLabel
313,176 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/29068985-6556-… associations resolved on the elementary layer
393,176 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… typed the way the ontology types it
402,010 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/19704 prefLabel ef:agent/bootstrap_labels ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v0 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v1
ef:activity/change/20260821T1554374006150000/19705 name ef:agent/bootstrap_labels ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v1 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v2
ef:activity/change/20260821T1554374006150000/19706 synonyms ef:agent/bootstrap_labels ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v2 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v3
ef:activity/change/20260821T1554374006150000/64316 context ef:agent/default_context_mapping ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v3 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v4
ef:activity/change/20260821T1554374006150000/64317 context_iri ef:agent/default_context_mapping ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v4 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v5
ef:activity/change/20260821T1554374006150000/219745 unit_iri ef:agent/unit_normalization ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v5 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v6
ef:activity/change/20260821T1554374006150000/227042 ec_numbers ef:agent/ec_cross_check ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v6 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v7
ef:activity/change/20260821T1554374006150000/245467 properties ef:agent/enrich_references ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v7 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v8
ef:activity/change/20260821T1554374006150000/245468 skos_definition ef:agent/enrich_references ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v8 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v9
ef:activity/change/20260821T1554374006150000/245469 references ef:agent/enrich_references ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v9 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v10
ef:activity/change/20260821T1554374006150000/253588 properties ef:agent/rdkit_pre_consensus ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v10 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v11
ef:activity/change/20260821T1554374006150000/256943 altLabel ef:agent/chebi_altlabels ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v11 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v12
ef:activity/change/20260821T1554374006150000/261940 altLabel ef:agent/consensus_match ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v12 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v13
ef:activity/change/20260821T1554374006150000/261941 cas_match_labels ef:agent/consensus_match ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v13 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v14
ef:activity/change/20260821T1554374006150000/278808 properties ef:agent/opsin_iupac ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v14 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v15
ef:activity/change/20260821T1554374006150000/285598 properties ef:agent/rdkit_post_consensus ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v15 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v16
ef:activity/change/20260821T1554374006150000/293050 altLabel ef:agent/dedupe_altlabels ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v16 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v17
ef:activity/change/20260821T1554374006150000/313176 concept_associations ef:agent/carry_associations_onto_flows ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v17 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v18
ef:activity/change/20260821T1554374006150000/393176 properties ef:agent/normalise_property_values ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v18 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v19
ef:activity/change/20260821T1554374006150000/402010 types ef:agent/link_flows_to_their_substance ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v19 ef:flow/29068985-6556-11dd-ad8b-0800200c9a66/v20

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