Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 4 catalogue altLabel value(s): 'AVM 0703' (grade code), 'MK 125' (grade code), 'NSC 34521' (registry code), 'OCS 01' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=dexamethasone||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'50-02-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-0c357899caef61e8: {'50-02-2': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['50-02-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_41879']; candidate_pubchem_cids=[3003, 5743, 9782, 451600, 5702035, 6610335, 9830630, 12358601, 71308592, 139033726, 145705940, 163285103, 171036213]; selected_pubchem_cids=[5743]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
3,840 bootstrap_labels prefLabel [{"@value":"dexamethasone","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… Bootstrapped prefLabel from legacy name field
3,841 bootstrap_labels name dexamethasone Purged legacy name field to enforce prefLabel usage
3,842 bootstrap_labels synonyms ["organic","dexamethasone"] [] Removed legacy synonyms field in favor of structured labels
64,762 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Medium stack, <150 meters","population_density":"Rural (<1000 peop… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
64,763 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-mest15me-ru10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
214,624 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,975 normalize_name_case prefLabel [{"@value":"dexamethasone","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… [{"@value":"Dexamethasone","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
230,885 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H29FO5"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
230,886 enrich_references skos_definition [{"@value":"A fluorinated steroid that is 9-fluoropregna-1,4-diene substituted by hydroxy groups at positions 11, 17 an… Merged ChEBI/PubChem definitions into skos:definition
230,887 enrich_references references [] [{"@id":"beilstein:2066652","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['50-02-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_41879']; candidate_pubchem_cids=[3003, 5743, 9782, 451600, 5702035, 6610335, 9830630, 12358601, 71308592, 139033726, 145705940, 163285103, 171036213]; selected_pubchem_cids=[5743]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,388 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H29FO5"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H29FO5"… rdkit_pre_consensus from 'CC1CC2C3CCC4=CC(=O)C=CC4(C3(C(CC2(C1(C(=O)CO)O)C)O)F)C'; added: inchi2d_string, monoisotopic_mass
254,868 chebi_altlabels altLabel [] [{"@value":"(11beta,16alpha)-9-fluoro-11,17,21-trihydroxy-16-methylpregna-1,4-diene-3,20-dione","@language":"en","sourc… Added 32 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
265,617 consensus_match altLabel [{"@value":"(11beta,16alpha)-9-fluoro-11,17,21-trihydroxy-16-methylpregna-1,4-diene-3,20-dione","@language":"en","sourc… [{"@value":"(11beta,16alpha)-9-fluoro-11,17,21-trihydroxy-16-methylpregna-1,4-diene-3,20-dione","@language":"en","sourc… group_key=dexamethasone||dimension=Environmental > media=Water > water_body=Surface water; cas=50-02-2; added Common Chemistry CAS names as altLabel: (11β,16α)-9-Fluoro-11,17,21-trihydroxy-16-methylpregna-1,4-diene-3,20-dione, 1-Dehydro-16α-methyl-9α-fluorohydrocortisone, 16α-Methyl-9α-fluoro-1,4-pregnadiene-11β,17α,21-triol-3,20-dione, 16α-Methyl-9α-fluoro-11β,17α,21-trihydroxypregna-1,4-diene-3,20-dione, 16α-Methyl-9α-fluoro-Δ<sup>1</sup>-hydrocortisone, 16α-Methyl-9α-fluoroprednisolone, 24: PN: US20220380460 SEQID: 25 claimed sequence, 9-Fluoro-11β,17,21-trihydroxy-16α-methylpregna-1,4-diene-3,20-dione, 9α-Fluoro-11β,17α,21-trihydroxy-16α-methyl-1,4-pregnadiene-3,20-dione, 9α-Fluoro-16α-methyl-1,4-pregnadiene-11β,17α,21-triol-3,20-dione, 9α-Fluoro-16α-methyl-11β,17,21-trihydroxypregna-1,4-diene-3,20-dione, 9α-Fluoro-16α-methylprednisolone, AVM 0703, Adexone, Aphtasolon, Aphthasolone, Corsone, DEX, De-Sone LA, Decaderm, Decadron A, Decasone, Dekacort, Dekort, Delipos, Deltafluorene, Dergramin, Deronil, Desadrene, Desameton, Deseronil, Dexa-Cortidelt, Dexa-Mamallet, Dexa-Scheroson, Dexa-sine, Dexacort, Dexadeltone, Dexafarma, Dexalona, Dexaltin, Dexameth, Dexamethasone alcohol, Dexamonozon, Dexapolcort, Dexapos, Dexaprol, Dexaratiopharm, Dexaven, Dexinoral, Dexium, Dexmethsone, Dexone, Dexonium, Dextelan, Dextenza, Dinormon, Dxevo, Etacortilen, Fluormone, Fluorocort, Gammacorten, Gentalipos, HL-Dex, Hexadecadrol, Isopto-Dex, Lokalison F, Loverine, Luxazone, MK 125, MeSH ID: D003907, Minidex, NSC 34521, Neofordex, OCS 01, Oftan, Pet-Derm III, Posurdex, Prednisolon F, Prednisolone F, Pregna-1,4-diene-3,20-dione, 9-fluoro-11,17,21-trihydroxy-16-methyl-, (11β,16α)-, Pregna-1,4-diene-3,20-dione, 9-fluoro-11β,17,21-trihydroxy-16α-methyl-, Superprednol, Surodex, Visumetazone; object_uuid=fo-0c357899caef61e8
265,618 consensus_match cas_match_labels {"50-02-2":"exactMatch"} group_key=dexamethasone||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'50-02-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-0c357899caef61e8: {'50-02-2': 'exactMatch'}
274,520 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H29FO5"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H29FO5"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(11beta,16alpha)-9-fluoro-11,17,21-trihydroxy-16-methylpregna-1,4-diene-3,20-dione'
280,963 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H29FO5"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H29FO5"… rdkit_post_consensus from 'C[C@@H]1C[C@H]2[C@@H]3CCC4=CC(=O)C=C[C@]4(C)[C@@]3(F)[C@@H](O)C[C@]2(C)[C@@]1(O)C(=O)CO'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,044 strip_catalogue_altlabels altLabel [{"@value":"(11beta,16alpha)-9-fluoro-11,17,21-trihydroxy-16-methylpregna-1,4-diene-3,20-dione","@language":"en","sourc… [{"@value":"(11beta,16alpha)-9-fluoro-11,17,21-trihydroxy-16-methylpregna-1,4-diene-3,20-dione","@language":"en","sourc… Removed 4 catalogue altLabel value(s): 'AVM 0703' (grade code), 'MK 125' (grade code), 'NSC 34521' (registry code), 'OCS 01' (grade code)
313,399 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/29a29162-c80e-… associations resolved on the elementary layer
388,820 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H29FO5"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H29FO5"… typed the way the ontology types it
395,712 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
395,713 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_78298","rdfs:label":"environmental contaminant","http://www.w3.org/2004/0… the substance's answer, copied onto its flow
395,714 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H29FO5"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H29FO5"… the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/3840 prefLabel ef:agent/bootstrap_labels ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v0 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v1
ef:activity/change/20260822T0600486828500000/3841 name ef:agent/bootstrap_labels ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v1 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v2
ef:activity/change/20260822T0600486828500000/3842 synonyms ef:agent/bootstrap_labels ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v2 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v3
ef:activity/change/20260822T0600486828500000/64762 context ef:agent/default_context_mapping ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v3 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v4
ef:activity/change/20260822T0600486828500000/64763 context_iri ef:agent/default_context_mapping ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v4 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v5
ef:activity/change/20260822T0600486828500000/214624 unit_iri ef:agent/unit_normalization ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v5 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v6
ef:activity/change/20260822T0600486828500000/221975 prefLabel ef:agent/normalize_name_case ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v6 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v7
ef:activity/change/20260822T0600486828500000/230885 properties ef:agent/enrich_references ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v7 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v8
ef:activity/change/20260822T0600486828500000/230886 skos_definition ef:agent/enrich_references ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v8 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v9
ef:activity/change/20260822T0600486828500000/230887 references ef:agent/enrich_references ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v9 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v10
ef:activity/change/20260822T0600486828500000/249388 properties ef:agent/rdkit_pre_consensus ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v10 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v11
ef:activity/change/20260822T0600486828500000/254868 altLabel ef:agent/chebi_altlabels ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v11 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v12
ef:activity/change/20260822T0600486828500000/265617 altLabel ef:agent/consensus_match ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v12 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v13
ef:activity/change/20260822T0600486828500000/265618 cas_match_labels ef:agent/consensus_match ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v13 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v14
ef:activity/change/20260822T0600486828500000/274520 properties ef:agent/opsin_iupac ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v14 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v15
ef:activity/change/20260822T0600486828500000/280963 properties ef:agent/rdkit_post_consensus ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v15 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v16
ef:activity/change/20260822T0600486828500000/288044 altLabel ef:agent/strip_catalogue_altlabels ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v16 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v17
ef:activity/change/20260822T0600486828500000/313399 concept_associations ef:agent/carry_associations_onto_flows ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v17 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v18
ef:activity/change/20260822T0600486828500000/388820 properties ef:agent/normalise_property_values ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v18 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v19
ef:activity/change/20260822T0600486828500000/395712 types ef:agent/link_flows_to_their_substance ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v19 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v20
ef:activity/change/20260822T0600486828500000/395713 roles ef:agent/link_flows_to_their_substance ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v20 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v21
ef:activity/change/20260822T0600486828500000/395714 properties ef:agent/link_flows_to_their_substance ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v21 ef:flow/29a29162-c80e-4b28-a40b-f085b7de037e/v22

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