Neral
Everything that changed this flow. Back to the flow
2a7595f7-2b7c-4c9c-90c9-5e6613c44137
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 4 | chebi_altlabels, consensus_match, dedupe_altlabels | Deduplicated altLabel values and removed entries matching prefLabel |
| prefLabel | 2 | bootstrap_labels, consensus_match | cas=106-26-3; cc_chebi_agreed_name='Neral'; object_uuid=fo-aeea2a8edc0c125f |
| cas_match_labels | 1 | consensus_match | group_key=(z)-3,7-dimethylocta-2,6-dienal||dimension=Environmental > media=Water > water_body=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'106-26-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-aeea2a8edc0c125f: {'106-26-3': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['106-26-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_29020']; candidate_pubchem_cids=[8843, 638011, 643779]; selected_pubchem_cids=[643779]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
22| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 13,466 | bootstrap_labels | prefLabel | — | [{"@value":"(z)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:… | Bootstrapped prefLabel from legacy name field |
| 13,467 | bootstrap_labels | name | (z)-3,7-dimethylocta-2,6-dienal | — | Purged legacy name field to enforce prefLabel usage |
| 13,468 | bootstrap_labels | synonyms | ["organic","(z)-3,7-dimethylocta-2,6-dienal","neral"] | [] | Removed legacy synonyms field in favor of structured labels |
| 65,226 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Ground","geography":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| 65,227 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-grou-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| 217,788 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 239,940 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 239,941 | enrich_references | skos_definition | — | [{"@value":"An enal that is 3,7-dimethyloctanal with unsaturation at positions C-2 and C-6. It has been isolated form t… | Merged ChEBI/PubChem definitions into skos:definition |
| 239,942 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J3.242E","provenance":{"prov:wasGeneratedBy":"enrich_reference… | Added references with provenance; cas_numbers=['106-26-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_29020']; candidate_pubchem_cids=[8843, 638011, 643779]; selected_pubchem_cids=[643779]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 251,988 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | rdkit_pre_consensus from 'CC(=CCC/C(=C\\C=O)/C)C'; added: monoisotopic_mass |
| 256,212 | chebi_altlabels | altLabel | [] | [{"@value":"(2Z)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… | Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 257,929 | consensus_match | prefLabel | [{"@value":"(z)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:… | [{"@value":"Neral","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"consensus… | cas=106-26-3; cc_chebi_agreed_name='Neral'; object_uuid=fo-aeea2a8edc0c125f |
| 257,930 | consensus_match | altLabel | [{"@value":"(2Z)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… | [{"@value":"(2Z)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… | cas=106-26-3; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-aeea2a8edc0c125f |
| 257,931 | consensus_match | altLabel | [{"@value":"(2Z)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… | [{"@value":"(2Z)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… | group_key=(z)-3,7-dimethylocta-2,6-dienal||dimension=Environmental > media=Water > water_body=Long-term; cas=106-26-3; added Common Chemistry CAS names as altLabel: (2<em>Z</em>)-3,7-Dimethyl-2,6-octadien-1-al, (2<em>Z</em>)-3,7-Dimethyl-2,6-octadienal, (<em>Z</em>)-3,7-Dimethyl-2,6-octadienal, (<em>Z</em>)-Citral, (<em>Z</em>)-Neral, 2,6-Octadienal, 3,7-dimethyl-, (2<em>Z</em>)-, 2,6-Octadienal, 3,7-dimethyl-, (<em>Z</em>)-, 2-<em>cis</em>-3,7-Dimethyl-2,6-octadienal, <em>cis</em>-3,7-Dimethyl-2,6-octadienal, <em>cis</em>-Geranial, Z-Citral, β-Citral; object_uuid=fo-aeea2a8edc0c125f |
| 257,932 | consensus_match | cas_match_labels | — | {"106-26-3":"exactMatch"} | group_key=(z)-3,7-dimethylocta-2,6-dienal||dimension=Environmental > media=Water > water_body=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'106-26-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-aeea2a8edc0c125f: {'106-26-3': 'exactMatch'} |
| 277,185 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Neral' |
| 283,847 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | rdkit_post_consensus from 'CC(C)=CCC/C(C)=C\\C=O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 292,691 | dedupe_altlabels | altLabel | [{"@value":"(2Z)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… | [{"@value":"(2Z)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… | Deduplicated altLabel values and removed entries matching prefLabel |
| 313,631 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/2a7595f7-2b7c-… | associations resolved on the elementary layer |
| 391,533 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | typed the way the ontology types it |
| 399,610 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 399,611 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | the substance's answer, copied onto its flow |
PROV-O trail
22 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/13466 | prefLabel | ef:agent/bootstrap_labels | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v0 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v1 |
| ef:activity/change/20260821T1554374006150000/13467 | name | ef:agent/bootstrap_labels | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v1 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v2 |
| ef:activity/change/20260821T1554374006150000/13468 | synonyms | ef:agent/bootstrap_labels | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v2 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v3 |
| ef:activity/change/20260821T1554374006150000/65226 | context | ef:agent/default_context_mapping | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v3 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v4 |
| ef:activity/change/20260821T1554374006150000/65227 | context_iri | ef:agent/default_context_mapping | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v4 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v5 |
| ef:activity/change/20260821T1554374006150000/217788 | unit_iri | ef:agent/unit_normalization | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v5 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v6 |
| ef:activity/change/20260821T1554374006150000/239940 | properties | ef:agent/enrich_references | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v6 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v7 |
| ef:activity/change/20260821T1554374006150000/239941 | skos_definition | ef:agent/enrich_references | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v7 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v8 |
| ef:activity/change/20260821T1554374006150000/239942 | references | ef:agent/enrich_references | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v8 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v9 |
| ef:activity/change/20260821T1554374006150000/251988 | properties | ef:agent/rdkit_pre_consensus | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v9 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v10 |
| ef:activity/change/20260821T1554374006150000/256212 | altLabel | ef:agent/chebi_altlabels | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v10 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v11 |
| ef:activity/change/20260821T1554374006150000/257929 | prefLabel | ef:agent/consensus_match | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v11 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v12 |
| ef:activity/change/20260821T1554374006150000/257930 | altLabel | ef:agent/consensus_match | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v12 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v13 |
| ef:activity/change/20260821T1554374006150000/257931 | altLabel | ef:agent/consensus_match | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v13 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v14 |
| ef:activity/change/20260821T1554374006150000/257932 | cas_match_labels | ef:agent/consensus_match | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v14 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v15 |
| ef:activity/change/20260821T1554374006150000/277185 | properties | ef:agent/opsin_iupac | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v15 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v16 |
| ef:activity/change/20260821T1554374006150000/283847 | properties | ef:agent/rdkit_post_consensus | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v16 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v17 |
| ef:activity/change/20260821T1554374006150000/292691 | altLabel | ef:agent/dedupe_altlabels | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v17 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v18 |
| ef:activity/change/20260821T1554374006150000/313631 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v18 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v19 |
| ef:activity/change/20260821T1554374006150000/391533 | properties | ef:agent/normalise_property_values | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v19 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v20 |
| ef:activity/change/20260821T1554374006150000/399610 | types | ef:agent/link_flows_to_their_substance | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v20 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v21 |
| ef:activity/change/20260821T1554374006150000/399611 | properties | ef:agent/link_flows_to_their_substance | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v21 | ef:flow/2a7595f7-2b7c-4c9c-90c9-5e6613c44137/v22 |