Citral
Everything that changed this flow. Back to the flow
2d91e2be-386f-4f65-9c2b-a1546821e64e
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 4 | enrich_references, normalise_property_values, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 6170' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=citral||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'5392-40-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-48367f2ee96596bf: {'5392-40-5': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['5392-40-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_23316']; candidate_pubchem_cids=[8843, 638011, 643779]; selected_pubchem_cids=[8843]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 16,883 | bootstrap_labels | prefLabel | — | [{"@value":"citral","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… | Bootstrapped prefLabel from legacy name field |
| 16,884 | bootstrap_labels | name | citral | — | Purged legacy name field to enforce prefLabel usage |
| 16,885 | bootstrap_labels | synonyms | ["(2E)-3,7-Dimethyl-2,6-octadienal","(2E)-3,7-dimethylocta-2,6-dienal","(E)-3,7-Dimethyl-2,6-octadienal","(E)-3,7-Dimet… | [] | Removed legacy synonyms field in favor of structured labels |
| 67,084 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 67,085 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 218,883 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 224,960 | normalize_name_case | prefLabel | [{"@value":"citral","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… | [{"@value":"Citral","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 243,050 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1, commonchemistry_cas=['5392-40-5']) |
| 243,051 | enrich_references | skos_definition | — | [{"@value":"An enal that consists of octa-2,6-dienal bearing methyl substituents at positions 3 and 7. A mixture of the… | Merged ChEBI/PubChem definitions into skos:definition |
| 243,052 | enrich_references | references | [] | [{"@id":"beilstein:1721871","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… | Added references with provenance; cas_numbers=['5392-40-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_23316']; candidate_pubchem_cids=[8843, 638011, 643779]; selected_pubchem_cids=[8843]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 252,894 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | rdkit_pre_consensus from 'CC(=CCCC(=CC=O)C)C'; added: monoisotopic_mass |
| 256,617 | chebi_altlabels | altLabel | [] | [{"@value":"(2E)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… | Added 13 ChEBI synonym(s) as altLabel from 2 linked ChEBI record(s) |
| 265,225 | consensus_match | altLabel | [{"@value":"(2E)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… | [{"@value":"(2E)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… | group_key=citral||dimension=Environmental > media=Ground > geography=Agricultural; cas=5392-40-5; added Common Chemistry CAS names as altLabel: 2,6-Octadienal, 3,7-dimethyl-, 3,7-Dimethyl-2,6-octadien-1-al, Citral PQ Extra, Lemarome N, Lemsyn GB, NSC 6170; object_uuid=fo-48367f2ee96596bf |
| 265,226 | consensus_match | cas_match_labels | — | {"5392-40-5":"exactMatch"} | group_key=citral||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'5392-40-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-48367f2ee96596bf: {'5392-40-5': 'exactMatch'} |
| 284,847 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | rdkit_post_consensus from 'CC(=CCCC(=CC=O)C)C'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 290,707 | strip_catalogue_altlabels | altLabel | [{"@value":"(2E)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… | [{"@value":"(2E)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… | Removed 1 catalogue altLabel value(s): 'NSC 6170' (registry code) |
| 314,579 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/2d91e2be-386f-… | associations resolved on the elementary layer |
| 392,468 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | typed the way the ontology types it |
| 400,944 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 400,945 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24852","rdfs:label":"insecticide","http://www.w3.org/2004/02/skos/core#de… | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T1416470405690000/16883 | prefLabel | ef:agent/bootstrap_labels | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v0 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v1 |
| ef:activity/change/20260820T1416470405690000/16884 | name | ef:agent/bootstrap_labels | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v1 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v2 |
| ef:activity/change/20260820T1416470405690000/16885 | synonyms | ef:agent/bootstrap_labels | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v2 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v3 |
| ef:activity/change/20260820T1416470405690000/67084 | context | ef:agent/default_context_mapping | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v3 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v4 |
| ef:activity/change/20260820T1416470405690000/67085 | context_iri | ef:agent/default_context_mapping | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v4 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v5 |
| ef:activity/change/20260820T1416470405690000/218883 | unit_iri | ef:agent/unit_normalization | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v5 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v6 |
| ef:activity/change/20260820T1416470405690000/224960 | prefLabel | ef:agent/normalize_name_case | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v6 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v7 |
| ef:activity/change/20260820T1416470405690000/243050 | properties | ef:agent/enrich_references | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v7 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v8 |
| ef:activity/change/20260820T1416470405690000/243051 | skos_definition | ef:agent/enrich_references | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v8 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v9 |
| ef:activity/change/20260820T1416470405690000/243052 | references | ef:agent/enrich_references | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v9 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v10 |
| ef:activity/change/20260820T1416470405690000/252894 | properties | ef:agent/rdkit_pre_consensus | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v10 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v11 |
| ef:activity/change/20260820T1416470405690000/256617 | altLabel | ef:agent/chebi_altlabels | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v11 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v12 |
| ef:activity/change/20260820T1416470405690000/265225 | altLabel | ef:agent/consensus_match | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v12 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v13 |
| ef:activity/change/20260820T1416470405690000/265226 | cas_match_labels | ef:agent/consensus_match | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v13 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v14 |
| ef:activity/change/20260820T1416470405690000/284847 | properties | ef:agent/rdkit_post_consensus | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v14 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v15 |
| ef:activity/change/20260820T1416470405690000/290707 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v15 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v16 |
| ef:activity/change/20260820T1416470405690000/314579 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v16 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v17 |
| ef:activity/change/20260820T1416470405690000/392468 | properties | ef:agent/normalise_property_values | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v17 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v18 |
| ef:activity/change/20260820T1416470405690000/400944 | types | ef:agent/link_flows_to_their_substance | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v18 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v19 |
| ef:activity/change/20260820T1416470405690000/400945 | roles | ef:agent/link_flows_to_their_substance | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v19 | ef:flow/2d91e2be-386f-4f65-9c2b-a1546821e64e/v20 |