Consensus flow list

By field

14 fields
Field Changes Written by Latest note
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 3 catalogue altLabel value(s): 'NSC 335306' (registry code), 'R 31520' (grade code), 'S 4105' (grade code)
properties 3 normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=closantel||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'57808-65-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-d25b2c89e758062f: {'57808-65-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['57808-65-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_77053']; candidate_pubchem_cids=[42574, 72715766, 72715780, 126963491]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
20,497 bootstrap_labels prefLabel [{"@value":"closantel","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Bootstrapped prefLabel from legacy name field
20,498 bootstrap_labels name closantel Purged legacy name field to enforce prefLabel usage
20,499 bootstrap_labels synonyms ["5'-Chloro-.alpha.4-(p-chlorophenyl)-.alpha.4-cyano-3,5-diiodo-2',4'-salicyloxylidide","5'-Chloro-4'-(4-chloro-alpha-c… [] Removed legacy synonyms field in favor of structured labels
67,968 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Ocean"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
67,969 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-ocea Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
219,980 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,744 normalize_name_case prefLabel [{"@value":"closantel","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… [{"@value":"Closantel","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
246,120 enrich_references skos_definition [{"@value":"A racemate comprising equimolar amounts of (R)- and (S)-clostanel. An anthelmintic, it is used (as the dihy… Merged ChEBI/PubChem definitions into skos:definition
246,121 enrich_references references [] [{"@id":"https://commonchemistry.cas.org/detail?cas_rn=57808-65-8","provenance":{"prov:wasGeneratedBy":"enrich_referenc… Added references with provenance; cas_numbers=['57808-65-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_77053']; candidate_pubchem_cids=[42574, 72715766, 72715780, 126963491]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
257,020 chebi_altlabels altLabel [] [{"@value":"5'-chloro-alpha(4)-(p-chlorophenyl)-alpha(4)-cyano-3,5-diiodo-2',4'-salicyloxylidide","@language":"en","sou… Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
265,253 consensus_match altLabel [{"@value":"5'-chloro-alpha(4)-(p-chlorophenyl)-alpha(4)-cyano-3,5-diiodo-2',4'-salicyloxylidide","@language":"en","sou… [{"@value":"5'-chloro-alpha(4)-(p-chlorophenyl)-alpha(4)-cyano-3,5-diiodo-2',4'-salicyloxylidide","@language":"en","sou… group_key=closantel||dimension=Environmental > media=Water > water_body=Ocean; cas=57808-65-8; added Common Chemistry CAS names as altLabel: <em>N</em>-[5-Chloro-4-[(4-chlorophenyl)cyanomethyl]-2-methylphenyl]-2-hydroxy-3,5-diiodobenzamide, Benzamide, <em>N</em>-[5-chloro-4-[(4-chlorophenyl)cyanomethyl]-2-methylphenyl]-2-hydroxy-3,5-diiodo-, Clozantin, NSC 335306, S 4105, Zycloz; object_uuid=fo-d25b2c89e758062f
265,254 consensus_match cas_match_labels {"57808-65-8":"exactMatch"} group_key=closantel||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'57808-65-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-d25b2c89e758062f: {'57808-65-8': 'exactMatch'}
279,003 opsin_iupac properties {} {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'rac-N-{5-chloro-4-[(4-chlorophenyl)(cyano)methyl]-2-methylphenyl}-2-hydroxy-3,5-diiodobenzamide'
285,825 rdkit_post_consensus properties {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… rdkit_post_consensus from 'Cc1cc(C(C#N)c2ccc(Cl)cc2)c(Cl)cc1NC(=O)c1cc(I)cc(I)c1O'; added: inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass; confirmed: smiles_string, inchi2d_string
291,357 strip_catalogue_altlabels altLabel [{"@value":"5'-chloro-alpha(4)-(p-chlorophenyl)-alpha(4)-cyano-3,5-diiodo-2',4'-salicyloxylidide","@language":"en","sou… [{"@value":"5'-chloro-alpha(4)-(p-chlorophenyl)-alpha(4)-cyano-3,5-diiodo-2',4'-salicyloxylidide","@language":"en","sou… Removed 3 catalogue altLabel value(s): 'NSC 335306' (registry code), 'R 31520' (grade code), 'S 4105' (grade code)
315,021 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/2f136f24-ffde-… associations resolved on the elementary layer
393,386 normalise_property_values properties {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… typed the way the ontology types it
402,311 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
402,312 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_25491","rdfs:label":"nematicide","http://www.w3.org/2004/02/skos/core#def… the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/20497 prefLabel ef:agent/bootstrap_labels ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v0 ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v1
ef:activity/change/20260820T0738569779880000/20498 name ef:agent/bootstrap_labels ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v1 ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v2
ef:activity/change/20260820T0738569779880000/20499 synonyms ef:agent/bootstrap_labels ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v2 ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v3
ef:activity/change/20260820T0738569779880000/67968 context ef:agent/default_context_mapping ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v3 ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v4
ef:activity/change/20260820T0738569779880000/67969 context_iri ef:agent/default_context_mapping ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v4 ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v5
ef:activity/change/20260820T0738569779880000/219980 unit_iri ef:agent/unit_normalization ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v5 ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v6
ef:activity/change/20260820T0738569779880000/225744 prefLabel ef:agent/normalize_name_case ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v6 ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v7
ef:activity/change/20260820T0738569779880000/246120 skos_definition ef:agent/enrich_references ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v7 ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v8
ef:activity/change/20260820T0738569779880000/246121 references ef:agent/enrich_references ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v8 ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v9
ef:activity/change/20260820T0738569779880000/257020 altLabel ef:agent/chebi_altlabels ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v9 ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v10
ef:activity/change/20260820T0738569779880000/265253 altLabel ef:agent/consensus_match ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v10 ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v11
ef:activity/change/20260820T0738569779880000/265254 cas_match_labels ef:agent/consensus_match ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v11 ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v12
ef:activity/change/20260820T0738569779880000/279003 properties ef:agent/opsin_iupac ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v12 ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v13
ef:activity/change/20260820T0738569779880000/285825 properties ef:agent/rdkit_post_consensus ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v13 ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v14
ef:activity/change/20260820T0738569779880000/291357 altLabel ef:agent/strip_catalogue_altlabels ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v14 ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v15
ef:activity/change/20260820T0738569779880000/315021 concept_associations ef:agent/carry_associations_onto_flows ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v15 ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v16
ef:activity/change/20260820T0738569779880000/393386 properties ef:agent/normalise_property_values ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v16 ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v17
ef:activity/change/20260820T0738569779880000/402311 types ef:agent/link_flows_to_their_substance ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v17 ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v18
ef:activity/change/20260820T0738569779880000/402312 roles ef:agent/link_flows_to_their_substance ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v18 ef:flow/2f136f24-ffde-4ee9-ba57-3fac9b1878d7/v19

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