Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 408419' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=2,2-dimethylsuccinicacid||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'597-43-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5cb5991076c68227: {'597-43-3': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['597-43-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_86537']; candidate_pubchem_cids=[11701, 107812]; selected_pubchem_cids=[11701]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
14,212 bootstrap_labels prefLabel [{"@value":"2,2-dimethylsuccinic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAtt… Bootstrapped prefLabel from legacy name field
14,213 bootstrap_labels name 2,2-dimethylsuccinic acid Purged legacy name field to enforce prefLabel usage
14,214 bootstrap_labels synonyms [".alpha.,.alpha.-Dimethyl-succinic acid","2,2-Dimethyl-1,4-butanedioic Acid","2,2-Dimethylbutanedioic acid","2,2-Dimet… [] Removed legacy synonyms field in favor of structured labels
68,200 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
68,201 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
218,033 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,381 normalize_name_case prefLabel [{"@value":"2,2-dimethylsuccinic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAtt… [{"@value":"2,2-dimethylsuccinic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAtt… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
240,638 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H10O4"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
240,639 enrich_references skos_definition [{"@value":"An α,ω-dicarboxylic acid that is succinic acid substituted by two methyl groups at positions 2 and 2 respec… Merged ChEBI/PubChem definitions into skos:definition
240,640 enrich_references references [] [{"@id":"foodb.food:FDB022833","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedT… Added references with provenance; cas_numbers=['597-43-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_86537']; candidate_pubchem_cids=[11701, 107812]; selected_pubchem_cids=[11701]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,190 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H10O4"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H10O4"],… rdkit_pre_consensus from 'CC(C)(CC(=O)O)C(=O)O'; added: monoisotopic_mass
256,293 chebi_altlabels altLabel [] [{"@value":"2,2-dimethylbutanedioic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
259,678 consensus_match altLabel [{"@value":"2,2-dimethylbutanedioic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… [{"@value":"2,2-dimethylbutanedioic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… group_key=2,2-dimethylsuccinicacid||dimension=Environmental > media=Ground > geography=Non-agricultural; cas=597-43-3; added Common Chemistry CAS names as altLabel: 2,2-Dimethylsuccinaldehyde, Butanedioic acid, 2,2-dimethyl-, NSC 408419, Succinic acid, 2,2-dimethyl-, Succinic acid, α,α-dimethyl-; object_uuid=fo-5cb5991076c68227
259,679 consensus_match cas_match_labels {"597-43-3":"exactMatch"} group_key=2,2-dimethylsuccinicacid||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'597-43-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5cb5991076c68227: {'597-43-3': 'exactMatch'}
277,382 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H10O4"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H10O4"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2,2-dimethylsuccinic Acid'
284,060 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H10O4"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H10O4"],… rdkit_post_consensus from 'CC(C)(CC(=O)O)C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
290,160 strip_catalogue_altlabels altLabel [{"@value":"2,2-dimethylbutanedioic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… [{"@value":"2,2-dimethylbutanedioic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… Removed 1 catalogue altLabel value(s): 'NSC 408419' (registry code)
315,110 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/2f786120-748c-… associations resolved on the elementary layer
391,731 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H10O4"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H10O4"],… typed the way the ontology types it
399,902 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T0609040591070000/14212 prefLabel ef:agent/bootstrap_labels ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v0 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v1
ef:activity/change/20260821T0609040591070000/14213 name ef:agent/bootstrap_labels ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v1 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v2
ef:activity/change/20260821T0609040591070000/14214 synonyms ef:agent/bootstrap_labels ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v2 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v3
ef:activity/change/20260821T0609040591070000/68200 context ef:agent/default_context_mapping ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v3 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v4
ef:activity/change/20260821T0609040591070000/68201 context_iri ef:agent/default_context_mapping ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v4 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v5
ef:activity/change/20260821T0609040591070000/218033 unit_iri ef:agent/unit_normalization ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v5 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v6
ef:activity/change/20260821T0609040591070000/224381 prefLabel ef:agent/normalize_name_case ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v6 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v7
ef:activity/change/20260821T0609040591070000/240638 properties ef:agent/enrich_references ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v7 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v8
ef:activity/change/20260821T0609040591070000/240639 skos_definition ef:agent/enrich_references ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v8 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v9
ef:activity/change/20260821T0609040591070000/240640 references ef:agent/enrich_references ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v9 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v10
ef:activity/change/20260821T0609040591070000/252190 properties ef:agent/rdkit_pre_consensus ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v10 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v11
ef:activity/change/20260821T0609040591070000/256293 altLabel ef:agent/chebi_altlabels ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v11 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v12
ef:activity/change/20260821T0609040591070000/259678 altLabel ef:agent/consensus_match ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v12 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v13
ef:activity/change/20260821T0609040591070000/259679 cas_match_labels ef:agent/consensus_match ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v13 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v14
ef:activity/change/20260821T0609040591070000/277382 properties ef:agent/opsin_iupac ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v14 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v15
ef:activity/change/20260821T0609040591070000/284060 properties ef:agent/rdkit_post_consensus ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v15 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v16
ef:activity/change/20260821T0609040591070000/290160 altLabel ef:agent/strip_catalogue_altlabels ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v16 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v17
ef:activity/change/20260821T0609040591070000/315110 concept_associations ef:agent/carry_associations_onto_flows ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v17 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v18
ef:activity/change/20260821T0609040591070000/391731 properties ef:agent/normalise_property_values ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v18 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v19
ef:activity/change/20260821T0609040591070000/399902 types ef:agent/link_flows_to_their_substance ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v19 ef:flow/2f786120-748c-4c19-824a-50b1aad5fd87/v20

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