Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match group_key=p-mentha-1,3-diene||dimension=Environmental > media=Water > water_body=Ocean; cas=99-86-5; added Common Chemistry CAS names as altLabel: 1,3-Cyclohexadiene, 1-methyl-4-(1-methylethyl)-, 1-Methyl-4-isopropyl-1,3-cyclohexadiene, 1-Methyl-4-propan-2-ylcyclohexa-1,3-diene, 4-Isopropyl-1-methyl-1,3-cyclohexadiene, α-Terpinen; object_uuid=fo-5748876447bc993f
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=99-86-5; cc_chebi_agreed_name='α-Terpinene'; object_uuid=fo-5748876447bc993f
cas_match_labels 1 consensus_match group_key=p-mentha-1,3-diene||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'99-86-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5748876447bc993f: {'99-86-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['99-86-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_10334']; candidate_pubchem_cids=[7462, 9300]; selected_pubchem_cids=[7462]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
19,947 bootstrap_labels prefLabel [{"@value":"p-mentha-1,3-diene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… Bootstrapped prefLabel from legacy name field
19,948 bootstrap_labels name p-mentha-1,3-diene Purged legacy name field to enforce prefLabel usage
19,949 bootstrap_labels synonyms ["organic"] [] Removed legacy synonyms field in favor of structured labels
68,510 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
68,511 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
219,817 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,622 normalize_name_case prefLabel [{"@value":"p-mentha-1,3-diene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… [{"@value":"P-mentha-1,3-diene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
245,672 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
245,673 enrich_references skos_definition [{"@value":"One of three isomeric monoterpenes differing in the positions of their two double bonds (β- and γ-terpinene… Merged ChEBI/PubChem definitions into skos:definition
245,674 enrich_references references [] [{"@id":"bpdb:2014","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"consens… Added references with provenance; cas_numbers=['99-86-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_10334']; candidate_pubchem_cids=[7462, 9300]; selected_pubchem_cids=[7462]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
253,647 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… rdkit_pre_consensus from 'CC1=CC=C(C(C)C)CC1'; added: monoisotopic_mass
256,966 chebi_altlabels altLabel [] [{"@value":"1-Methyl-4-(1-methylethyl)-1,3-cyclohexadiene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altl… Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
270,308 consensus_match prefLabel [{"@value":"P-mentha-1,3-diene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… [{"@value":"α-Terpinene","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"con… cas=99-86-5; cc_chebi_agreed_name='α-Terpinene'; object_uuid=fo-5748876447bc993f
270,309 consensus_match altLabel [{"@value":"1-Methyl-4-(1-methylethyl)-1,3-cyclohexadiene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altl… [{"@value":"1-Methyl-4-(1-methylethyl)-1,3-cyclohexadiene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altl… cas=99-86-5; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-5748876447bc993f
270,310 consensus_match altLabel [{"@value":"1-Methyl-4-(1-methylethyl)-1,3-cyclohexadiene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altl… [{"@value":"1-Methyl-4-(1-methylethyl)-1,3-cyclohexadiene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altl… group_key=p-mentha-1,3-diene||dimension=Environmental > media=Water > water_body=Ocean; cas=99-86-5; added Common Chemistry CAS names as altLabel: 1,3-Cyclohexadiene, 1-methyl-4-(1-methylethyl)-, 1-Methyl-4-isopropyl-1,3-cyclohexadiene, 1-Methyl-4-propan-2-ylcyclohexa-1,3-diene, 4-Isopropyl-1-methyl-1,3-cyclohexadiene, α-Terpinen; object_uuid=fo-5748876447bc993f
270,311 consensus_match cas_match_labels {"99-86-5":"exactMatch"} group_key=p-mentha-1,3-diene||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'99-86-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5748876447bc993f: {'99-86-5': 'exactMatch'}
278,858 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'α-Terpinene'
285,659 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… rdkit_post_consensus from 'CC1=CC=C(C(C)C)CC1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
315,265 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/3000e986-737b-… associations resolved on the elementary layer
393,228 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16"],"… typed the way the ontology types it
402,090 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T0609040591070000/19947 prefLabel ef:agent/bootstrap_labels ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v0 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v1
ef:activity/change/20260821T0609040591070000/19948 name ef:agent/bootstrap_labels ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v1 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v2
ef:activity/change/20260821T0609040591070000/19949 synonyms ef:agent/bootstrap_labels ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v2 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v3
ef:activity/change/20260821T0609040591070000/68510 context ef:agent/default_context_mapping ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v3 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v4
ef:activity/change/20260821T0609040591070000/68511 context_iri ef:agent/default_context_mapping ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v4 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v5
ef:activity/change/20260821T0609040591070000/219817 unit_iri ef:agent/unit_normalization ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v5 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v6
ef:activity/change/20260821T0609040591070000/225622 prefLabel ef:agent/normalize_name_case ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v6 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v7
ef:activity/change/20260821T0609040591070000/245672 properties ef:agent/enrich_references ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v7 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v8
ef:activity/change/20260821T0609040591070000/245673 skos_definition ef:agent/enrich_references ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v8 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v9
ef:activity/change/20260821T0609040591070000/245674 references ef:agent/enrich_references ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v9 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v10
ef:activity/change/20260821T0609040591070000/253647 properties ef:agent/rdkit_pre_consensus ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v10 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v11
ef:activity/change/20260821T0609040591070000/256966 altLabel ef:agent/chebi_altlabels ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v11 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v12
ef:activity/change/20260821T0609040591070000/270308 prefLabel ef:agent/consensus_match ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v12 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v13
ef:activity/change/20260821T0609040591070000/270309 altLabel ef:agent/consensus_match ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v13 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v14
ef:activity/change/20260821T0609040591070000/270310 altLabel ef:agent/consensus_match ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v14 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v15
ef:activity/change/20260821T0609040591070000/270311 cas_match_labels ef:agent/consensus_match ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v15 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v16
ef:activity/change/20260821T0609040591070000/278858 properties ef:agent/opsin_iupac ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v16 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v17
ef:activity/change/20260821T0609040591070000/285659 properties ef:agent/rdkit_post_consensus ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v17 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v18
ef:activity/change/20260821T0609040591070000/315265 concept_associations ef:agent/carry_associations_onto_flows ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v18 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v19
ef:activity/change/20260821T0609040591070000/393228 properties ef:agent/normalise_property_values ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v19 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v20
ef:activity/change/20260821T0609040591070000/402090 types ef:agent/link_flows_to_their_substance ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v20 ef:flow/3000e986-737b-4ebe-b082-4ec36005f266/v21

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