Sulfite
Everything that changed this flow. Back to the flow
32ccd374-6556-11dd-ad8b-0800200c9a66
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, dedupe_altlabels | Deduplicated altLabel values and removed entries matching prefLabel |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=sulfite||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'pubchem']; cas_sources={'14265-45-3': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-3dd9afbd1328e5e3: {'14265-45-3': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['14265-45-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_17359']; candidate_pubchem_cids=[1099, 1100, 22132154]; selected_pubchem_cids=[1099]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 20,859 | bootstrap_labels | prefLabel | — | [{"@value":"sulfite","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | Bootstrapped prefLabel from legacy name field |
| 20,860 | bootstrap_labels | name | sulfite | — | Purged legacy name field to enforce prefLabel usage |
| 20,861 | bootstrap_labels | synonyms | ["AC1L1AQ2","AC1LCV17","SHO3(-)","SO3(2-)","SO3-2","SULFONATE GROUP","Sulfiite (SO32-)","Sulfite (2-)","Sulfite dianion… | [] | Removed legacy synonyms field in favor of structured labels |
| 70,502 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Medium stack, <150 meters","population_density":"Rural (<1000 peop… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks |
| 70,503 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-mest15me-ru10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks |
| 220,074 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 225,819 | normalize_name_case | prefLabel | [{"@value":"sulfite","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | [{"@value":"Sulfite","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 246,393 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O3S","O3S-… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 246,394 | enrich_references | skos_definition | — | [{"@value":"A sulfur oxoanion that is the conjugate base of hydrogen sulfite (H2SO3).","@language":"en","provenance":{"… | Merged ChEBI/PubChem definitions into skos:definition |
| 246,395 | enrich_references | references | [] | [{"@id":"gmelin:1449","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… | Added references with provenance; cas_numbers=['14265-45-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_17359']; candidate_pubchem_cids=[1099, 1100, 22132154]; selected_pubchem_cids=[1099]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 253,862 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O3S","O3S-… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O3S","O3S-… | rdkit_pre_consensus from 'O=S([O-])[O-]'; added: monoisotopic_mass |
| 257,039 | chebi_altlabels | altLabel | [] | [{"@value":"SO3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… | Added 8 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 272,170 | consensus_match | altLabel | [{"@value":"SO3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… | [{"@value":"SO3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… | group_key=sulfite||dimension=Environmental > media=Ground > geography=Agricultural; cas=14265-45-3; added Common Chemistry CAS names as altLabel: Sulfate(2-), trioxo-, Sulfite (SO<sub>3</sub><sup>2-</sup>), Sulfite dianion, Sulfite(2-), Sulfurous acid, ion(2-); object_uuid=fo-3dd9afbd1328e5e3 |
| 272,171 | consensus_match | cas_match_labels | — | {"14265-45-3":"exactMatch"} | group_key=sulfite||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'pubchem']; cas_sources={'14265-45-3': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-3dd9afbd1328e5e3: {'14265-45-3': 'exactMatch'} |
| 279,055 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O3S","O3S-… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O3S","O3S-… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Sulfite' |
| 285,895 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O3S","O3S-… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O3S","O3S-… | rdkit_post_consensus from 'O=S([O-])[O-]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 293,102 | dedupe_altlabels | altLabel | [{"@value":"SO3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… | [{"@value":"SO3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… | Deduplicated altLabel values and removed entries matching prefLabel |
| 316,268 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/32ccd374-6556-… | associations resolved on the elementary layer |
| 393,447 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O3S","O3S-… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O3S","O3S-… | typed the way the ontology types it |
| 402,410 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/MolecularAnion"] | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1302361922970000/20859 | prefLabel | ef:agent/bootstrap_labels | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v0 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v1 |
| ef:activity/change/20260821T1302361922970000/20860 | name | ef:agent/bootstrap_labels | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v1 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v2 |
| ef:activity/change/20260821T1302361922970000/20861 | synonyms | ef:agent/bootstrap_labels | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v2 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v3 |
| ef:activity/change/20260821T1302361922970000/70502 | context | ef:agent/default_context_mapping | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v3 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v4 |
| ef:activity/change/20260821T1302361922970000/70503 | context_iri | ef:agent/default_context_mapping | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v4 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v5 |
| ef:activity/change/20260821T1302361922970000/220074 | unit_iri | ef:agent/unit_normalization | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v5 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v6 |
| ef:activity/change/20260821T1302361922970000/225819 | prefLabel | ef:agent/normalize_name_case | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v6 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v7 |
| ef:activity/change/20260821T1302361922970000/246393 | properties | ef:agent/enrich_references | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v7 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v8 |
| ef:activity/change/20260821T1302361922970000/246394 | skos_definition | ef:agent/enrich_references | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v8 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v9 |
| ef:activity/change/20260821T1302361922970000/246395 | references | ef:agent/enrich_references | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v9 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v10 |
| ef:activity/change/20260821T1302361922970000/253862 | properties | ef:agent/rdkit_pre_consensus | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v10 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v11 |
| ef:activity/change/20260821T1302361922970000/257039 | altLabel | ef:agent/chebi_altlabels | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v11 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v12 |
| ef:activity/change/20260821T1302361922970000/272170 | altLabel | ef:agent/consensus_match | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v12 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v13 |
| ef:activity/change/20260821T1302361922970000/272171 | cas_match_labels | ef:agent/consensus_match | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v13 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v14 |
| ef:activity/change/20260821T1302361922970000/279055 | properties | ef:agent/opsin_iupac | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v14 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v15 |
| ef:activity/change/20260821T1302361922970000/285895 | properties | ef:agent/rdkit_post_consensus | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v15 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v16 |
| ef:activity/change/20260821T1302361922970000/293102 | altLabel | ef:agent/dedupe_altlabels | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v16 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v17 |
| ef:activity/change/20260821T1302361922970000/316268 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v17 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v18 |
| ef:activity/change/20260821T1302361922970000/393447 | properties | ef:agent/normalise_property_values | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v18 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v19 |
| ef:activity/change/20260821T1302361922970000/402410 | types | ef:agent/link_flows_to_their_substance | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v19 | ef:flow/32ccd374-6556-11dd-ad8b-0800200c9a66/v20 |