Phoxim
Everything that changed this flow. Back to the flow
32cd2194-6556-11dd-ad8b-0800200c9a66
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 5 catalogue altLabel value(s): 'B 77488' (grade code), 'BAY 5621' (grade code), 'BAY 77488' (grade code), 'Bayer 5621' (trade name), 'Bayer 77488' (trade name) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=phoxim||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'14816-18-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f0245f036627f32c: {'14816-18-3': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['14816-18-3']; matched_chebi_ids=[]; candidate_pubchem_cids=[26927, 5360460, 9570290, 176448387]; selected_pubchem_cids=[26927]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 7,879 | bootstrap_labels | prefLabel | — | [{"@value":"phoxim","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… | Bootstrapped prefLabel from legacy name field |
| 7,880 | bootstrap_labels | name | phoxim | — | Purged legacy name field to enforce prefLabel usage |
| 7,881 | bootstrap_labels | synonyms | ["(Diethoxy-thiophosphoryloxyimino)-phenyl acetonitrile","2-(Diethoxyphosphinothioyloxyimino)-2-phenylacetonitrile","3,… | [] | Removed legacy synonyms field in favor of structured labels |
| 70,742 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Aircraft cruise height"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| 70,743 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-aicrhe | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| 215,973 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 222,951 | normalize_name_case | prefLabel | [{"@value":"phoxim","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… | [{"@value":"Phoxim","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 234,728 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H15N2O3… | Added ChEBI/PubChem properties (chebi_ids=0, pubchem_cids=1, commonchemistry_cas=['14816-18-3']) |
| 234,729 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 234,730 | enrich_references | references | [] | [{"@id":"https://chem.echa.europa.eu/100.035.337","provenance":{"prov:wasGeneratedBy":"enrich_references.pubchem_identi… | Added references with provenance; cas_numbers=['14816-18-3']; matched_chebi_ids=[]; candidate_pubchem_cids=[26927, 5360460, 9570290, 176448387]; selected_pubchem_cids=[26927]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 250,487 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H15N2O3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H15N2O3… | rdkit_pre_consensus from 'CCOP(=S)(OCC)ON=C(C#N)C1=CC=CC=C1'; added: molecular_mass, monoisotopic_mass |
| 255,468 | chebi_altlabels | altLabel | [] | [{"@value":"O,O-Diethyl-alpha-cyanobenzylidineaminooxyphosphonothiate","@language":"en","source":{"prov:wasGeneratedBy"… | Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 270,749 | consensus_match | altLabel | [{"@value":"O,O-Diethyl-alpha-cyanobenzylidineaminooxyphosphonothiate","@language":"en","source":{"prov:wasGeneratedBy"… | [{"@value":"O,O-Diethyl-alpha-cyanobenzylidineaminooxyphosphonothiate","@language":"en","source":{"prov:wasGeneratedBy"… | group_key=phoxim||dimension=Environmental > media=Ground > geography=Agricultural; cas=14816-18-3; added Common Chemistry CAS names as altLabel: 3,5-Dioxa-6-aza-4-phosphaoct-6-ene-8-nitrile, 4-ethoxy-7-phenyl-, 4-sulfide, <em>O</em>,<em>O</em>-Diethyl <em>O</em>-(α-cyanobenzylideneamino) phosphorothioate, B 77488, BAY 5621, BAY 77488, Basileum SI, Basileum SI 84, Basileum SI 84EC, Bayer 5621, Bayer 77488, Baythion, Benzoyl cyanide <em>O</em>-(diethoxyphosphinothioyl)oxime, Folaton, Glyoxylonitrile, phenyl-, oxime <em>O</em>,<em>O</em>-diethyl phosphorothioate, Jiubaojing, Phenylglyoxylonitrile oxime <em>O</em>,<em>O</em>-diethyl phosphorothioate, Phosphorothioic acid, <em>O</em>,<em>O</em>-diethyl ester, <em>O</em>-[(α-cyanobenzylidene)amino] deriv., Phosphorothioic acid, <em>O</em>-[(cyanophenylmethylene)azanyl] <em>O</em>,<em>O</em>-diethyl ester, Sebacil, Tomiguard PE 50, Toyothion, Valexon, Volaton, Volaton bjdse 20, Xylasan VL; object_uuid=fo-f0245f036627f32c |
| 270,750 | consensus_match | cas_match_labels | — | {"14816-18-3":"exactMatch"} | group_key=phoxim||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'14816-18-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f0245f036627f32c: {'14816-18-3': 'exactMatch'} |
| 275,669 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H15N2O3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H15N2O3… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'O-(alpha-cyanobenzylideneamino) O,O-diethyl thiophosphate' |
| 282,207 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H15N2O3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H15N2O3… | rdkit_post_consensus from 'CCOP(=S)(OCC)ON=C(C#N)c1ccccc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 288,898 | strip_catalogue_altlabels | altLabel | [{"@value":"O,O-Diethyl-alpha-cyanobenzylidineaminooxyphosphonothiate","@language":"en","source":{"prov:wasGeneratedBy"… | [{"@value":"O,O-Diethyl-alpha-cyanobenzylidineaminooxyphosphonothiate","@language":"en","source":{"prov:wasGeneratedBy"… | Removed 5 catalogue altLabel value(s): 'B 77488' (grade code), 'BAY 5621' (grade code), 'BAY 77488' (grade code), 'Bayer 5621' (trade name), 'Bayer 77488' (trade name) |
| 316,408 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/32cd2194-6556-… | associations resolved on the elementary layer |
| 389,998 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H15N2O3… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H15N2O3… | typed the way the ontology types it |
| 397,408 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 397,409 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_33286","rdfs:label":"agrochemical","http://www.w3.org/2004/02/skos/core#d… | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/7879 | prefLabel | ef:agent/bootstrap_labels | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v0 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v1 |
| ef:activity/change/20260820T0738569779880000/7880 | name | ef:agent/bootstrap_labels | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v1 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v2 |
| ef:activity/change/20260820T0738569779880000/7881 | synonyms | ef:agent/bootstrap_labels | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v2 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v3 |
| ef:activity/change/20260820T0738569779880000/70742 | context | ef:agent/default_context_mapping | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v3 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v4 |
| ef:activity/change/20260820T0738569779880000/70743 | context_iri | ef:agent/default_context_mapping | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v4 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v5 |
| ef:activity/change/20260820T0738569779880000/215973 | unit_iri | ef:agent/unit_normalization | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v5 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v6 |
| ef:activity/change/20260820T0738569779880000/222951 | prefLabel | ef:agent/normalize_name_case | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v6 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v7 |
| ef:activity/change/20260820T0738569779880000/234728 | properties | ef:agent/enrich_references | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v7 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v8 |
| ef:activity/change/20260820T0738569779880000/234729 | skos_definition | ef:agent/enrich_references | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v8 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v9 |
| ef:activity/change/20260820T0738569779880000/234730 | references | ef:agent/enrich_references | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v9 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v10 |
| ef:activity/change/20260820T0738569779880000/250487 | properties | ef:agent/rdkit_pre_consensus | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v10 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v11 |
| ef:activity/change/20260820T0738569779880000/255468 | altLabel | ef:agent/chebi_altlabels | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v11 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v12 |
| ef:activity/change/20260820T0738569779880000/270749 | altLabel | ef:agent/consensus_match | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v12 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v13 |
| ef:activity/change/20260820T0738569779880000/270750 | cas_match_labels | ef:agent/consensus_match | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v13 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v14 |
| ef:activity/change/20260820T0738569779880000/275669 | properties | ef:agent/opsin_iupac | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v14 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v15 |
| ef:activity/change/20260820T0738569779880000/282207 | properties | ef:agent/rdkit_post_consensus | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v15 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v16 |
| ef:activity/change/20260820T0738569779880000/288898 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v16 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v17 |
| ef:activity/change/20260820T0738569779880000/316408 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v17 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v18 |
| ef:activity/change/20260820T0738569779880000/389998 | properties | ef:agent/normalise_property_values | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v18 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v19 |
| ef:activity/change/20260820T0738569779880000/397408 | types | ef:agent/link_flows_to_their_substance | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v19 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v20 |
| ef:activity/change/20260820T0738569779880000/397409 | roles | ef:agent/link_flows_to_their_substance | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v20 | ef:flow/32cd2194-6556-11dd-ad8b-0800200c9a66/v21 |