Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 2 consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 408599' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=(2,6-xylyloxy)aceticacid||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['pubchem']; cas_sources={'13335-71-2': ['pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-cac07c77dd59ee93: {'13335-71-2': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['13335-71-2']; matched_chebi_ids=[]; candidate_pubchem_cids=[543, 101369]; selected_pubchem_cids=[101369]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
21,061 bootstrap_labels prefLabel [{"@value":"(2,6-xylyloxy) acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAt… Bootstrapped prefLabel from legacy name field
21,062 bootstrap_labels name (2,6-xylyloxy) acetic acid Purged legacy name field to enforce prefLabel usage
21,063 bootstrap_labels synonyms ["organic","(2,6-xylyloxy)aceticacid","a-172245.0"] [] Removed legacy synonyms field in favor of structured labels
72,142 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
72,143 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-noag Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
220,130 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,871 normalize_name_case prefLabel [{"@value":"(2,6-xylyloxy) acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAt… [{"@value":"(2,6-xylyloxy) Acetic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAt… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
246,541 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12O3"]… Added ChEBI/PubChem properties (chebi_ids=0, pubchem_cids=1)
246,542 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
246,543 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J779.929B","provenance":{"prov:wasGeneratedBy":"enrich_referen… Added references with provenance; cas_numbers=['13335-71-2']; matched_chebi_ids=[]; candidate_pubchem_cids=[543, 101369]; selected_pubchem_cids=[101369]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
253,913 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12O3"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12O3"]… rdkit_pre_consensus from 'CC1=C(C(=CC=C1)C)OCC(=O)O'; added: molecular_mass, monoisotopic_mass
257,626 consensus_match altLabel [] [{"@value":"(2,6-Dimethylphenoxy)acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:… group_key=(2,6-xylyloxy)aceticacid||dimension=Environmental > media=Ground > geography=Non-agricultural; cas=13335-71-2; added Common Chemistry CAS names as altLabel: (2,6-Dimethylphenoxy)acetic acid, 2-(2,6-Dimethylphenoxy)acetic acid, Acetic acid, (2,6-dimethylphenoxy)-, Acetic acid, (2,6-xylyloxy)-, Acetic acid, 2-(2,6-dimethylphenoxy)-, NSC 408599; object_uuid=fo-cac07c77dd59ee93
257,627 consensus_match cas_match_labels {"13335-71-2":"exactMatch"} group_key=(2,6-xylyloxy)aceticacid||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['pubchem']; cas_sources={'13335-71-2': ['pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-cac07c77dd59ee93: {'13335-71-2': 'exactMatch'}
279,113 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12O3"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12O3"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(2,6-xylyloxy) Acetic Acid'
285,962 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12O3"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12O3"]… rdkit_post_consensus from 'Cc1cccc(C)c1OCC(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,434 strip_catalogue_altlabels altLabel [{"@value":"(2,6-Dimethylphenoxy)acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:… [{"@value":"(2,6-Dimethylphenoxy)acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:… Removed 1 catalogue altLabel value(s): 'NSC 408599' (registry code)
317,108 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/34fa1dfc-a481-… associations resolved on the elementary layer
393,509 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12O3"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12O3"]… typed the way the ontology types it
402,504 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/21061 prefLabel ef:agent/bootstrap_labels ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v0 ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v1
ef:activity/change/20260820T0738569779880000/21062 name ef:agent/bootstrap_labels ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v1 ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v2
ef:activity/change/20260820T0738569779880000/21063 synonyms ef:agent/bootstrap_labels ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v2 ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v3
ef:activity/change/20260820T0738569779880000/72142 context ef:agent/default_context_mapping ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v3 ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v4
ef:activity/change/20260820T0738569779880000/72143 context_iri ef:agent/default_context_mapping ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v4 ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v5
ef:activity/change/20260820T0738569779880000/220130 unit_iri ef:agent/unit_normalization ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v5 ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v6
ef:activity/change/20260820T0738569779880000/225871 prefLabel ef:agent/normalize_name_case ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v6 ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v7
ef:activity/change/20260820T0738569779880000/246541 properties ef:agent/enrich_references ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v7 ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v8
ef:activity/change/20260820T0738569779880000/246542 skos_definition ef:agent/enrich_references ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v8 ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v9
ef:activity/change/20260820T0738569779880000/246543 references ef:agent/enrich_references ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v9 ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v10
ef:activity/change/20260820T0738569779880000/253913 properties ef:agent/rdkit_pre_consensus ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v10 ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v11
ef:activity/change/20260820T0738569779880000/257626 altLabel ef:agent/consensus_match ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v11 ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v12
ef:activity/change/20260820T0738569779880000/257627 cas_match_labels ef:agent/consensus_match ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v12 ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v13
ef:activity/change/20260820T0738569779880000/279113 properties ef:agent/opsin_iupac ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v13 ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v14
ef:activity/change/20260820T0738569779880000/285962 properties ef:agent/rdkit_post_consensus ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v14 ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v15
ef:activity/change/20260820T0738569779880000/291434 altLabel ef:agent/strip_catalogue_altlabels ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v15 ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v16
ef:activity/change/20260820T0738569779880000/317108 concept_associations ef:agent/carry_associations_onto_flows ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v16 ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v17
ef:activity/change/20260820T0738569779880000/393509 properties ef:agent/normalise_property_values ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v17 ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v18
ef:activity/change/20260820T0738569779880000/402504 types ef:agent/link_flows_to_their_substance ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v18 ef:flow/34fa1dfc-a481-4338-adef-dceed569ec1e/v19

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