Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'M 81' (grade code), 'M 81 (pharmaceutical)' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=thiometon||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'640-15-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ae6068a5d35c04a5: {'640-15-3': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['640-15-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38962']; candidate_pubchem_cids=[12541]; selected_pubchem_cids=[12541]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
5,334 bootstrap_labels prefLabel [{"@value":"thiometon","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Bootstrapped prefLabel from legacy name field
5,335 bootstrap_labels name thiometon Purged legacy name field to enforce prefLabel usage
5,336 bootstrap_labels synonyms ["2-Ethylthioethyl O,O-dimethyl phosphorodithioate","2-ethylsulfanylethylsulfanyl-dimethoxy-sulfanylidene-","AC1L1ZTF",… [] Removed legacy synonyms field in favor of structured labels
72,310 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
72,311 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
215,126 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,332 normalize_name_case prefLabel [{"@value":"thiometon","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… [{"@value":"Thiometon","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
232,316 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H15O2PS3… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
232,317 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
232,318 enrich_references references [] [{"@id":"beilstein:1707379","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['640-15-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38962']; candidate_pubchem_cids=[12541]; selected_pubchem_cids=[12541]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,798 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H15O2PS3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H15O2PS3… rdkit_pre_consensus from 'CCSCCSP(=S)(OC)OC'; added: monoisotopic_mass
255,064 chebi_altlabels altLabel [] [{"@value":"Ekatin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
272,608 consensus_match altLabel [{"@value":"Ekatin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… [{"@value":"Ekatin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… group_key=thiometon||dimension=Environmental > media=Air > strata=Unknown; cas=640-15-3; added Common Chemistry CAS names as altLabel: <em>O</em>,<em>O</em>-Dimethyl <em>S</em>-(2-ethylthioethyl) dithiophosphate, <em>S</em>-[2-(Ethylthio)ethyl] <em>O</em>,<em>O</em>-dimethyl phosphorodithioate, Dithiometon, Ekatin aerosol, Ethanethiol, 2-(ethylthio)-, <em>S</em>-ester with <em>O</em>,<em>O</em>-dimethyl phosphorodithioate, Intrathion, Intration, M 81 (pharmaceutical), Phosphorodithioic acid, <em>S</em>-[2-(ethylthio)ethyl] <em>O</em>,<em>O</em>-dimethyl ester, Veltin; object_uuid=fo-ae6068a5d35c04a5
272,609 consensus_match cas_match_labels {"640-15-3":"exactMatch"} group_key=thiometon||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'640-15-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ae6068a5d35c04a5: {'640-15-3': 'exactMatch'}
274,952 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H15O2PS3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H15O2PS3… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Phosphorodithioic acid, S-(2-(ethylthio)ethyl) O,O-dimethyl ester'
281,426 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H15O2PS3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H15O2PS3… rdkit_post_consensus from 'CCSCCSP(=S)(OC)OC'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,365 strip_catalogue_altlabels altLabel [{"@value":"Ekatin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… [{"@value":"Ekatin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… Removed 2 catalogue altLabel value(s): 'M 81' (grade code), 'M 81 (pharmaceutical)' (grade code)
317,192 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/35417f55-97f2-… associations resolved on the elementary layer
389,256 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H15O2PS3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H15O2PS3… typed the way the ontology types it
396,318 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
396,319 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_22153","rdfs:label":"acaricide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/5334 prefLabel ef:agent/bootstrap_labels ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v0 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v1
ef:activity/change/20260820T0738569779880000/5335 name ef:agent/bootstrap_labels ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v1 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v2
ef:activity/change/20260820T0738569779880000/5336 synonyms ef:agent/bootstrap_labels ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v2 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v3
ef:activity/change/20260820T0738569779880000/72310 context ef:agent/default_context_mapping ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v3 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v4
ef:activity/change/20260820T0738569779880000/72311 context_iri ef:agent/default_context_mapping ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v4 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v5
ef:activity/change/20260820T0738569779880000/215126 unit_iri ef:agent/unit_normalization ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v5 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v6
ef:activity/change/20260820T0738569779880000/222332 prefLabel ef:agent/normalize_name_case ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v6 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v7
ef:activity/change/20260820T0738569779880000/232316 properties ef:agent/enrich_references ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v7 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v8
ef:activity/change/20260820T0738569779880000/232317 skos_definition ef:agent/enrich_references ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v8 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v9
ef:activity/change/20260820T0738569779880000/232318 references ef:agent/enrich_references ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v9 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v10
ef:activity/change/20260820T0738569779880000/249798 properties ef:agent/rdkit_pre_consensus ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v10 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v11
ef:activity/change/20260820T0738569779880000/255064 altLabel ef:agent/chebi_altlabels ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v11 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v12
ef:activity/change/20260820T0738569779880000/272608 altLabel ef:agent/consensus_match ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v12 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v13
ef:activity/change/20260820T0738569779880000/272609 cas_match_labels ef:agent/consensus_match ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v13 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v14
ef:activity/change/20260820T0738569779880000/274952 properties ef:agent/opsin_iupac ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v14 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v15
ef:activity/change/20260820T0738569779880000/281426 properties ef:agent/rdkit_post_consensus ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v15 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v16
ef:activity/change/20260820T0738569779880000/288365 altLabel ef:agent/strip_catalogue_altlabels ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v16 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v17
ef:activity/change/20260820T0738569779880000/317192 concept_associations ef:agent/carry_associations_onto_flows ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v17 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v18
ef:activity/change/20260820T0738569779880000/389256 properties ef:agent/normalise_property_values ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v18 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v19
ef:activity/change/20260820T0738569779880000/396318 types ef:agent/link_flows_to_their_substance ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v19 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v20
ef:activity/change/20260820T0738569779880000/396319 roles ef:agent/link_flows_to_their_substance ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v20 ef:flow/35417f55-97f2-443a-9709-7cee73793b45/v21

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