Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 5 catalogue altLabel value(s): 'Emery 2216' (trade name), 'Metholene 2216' (trade name), 'NSC 4197' (registry code), 'Radia 7120' (trade name), 'Radia 7916' (trade name)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=methylpalmitate||dimension=Environmental > media=Water > water_body=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'112-39-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-0ed0afdfc83ddc0a: {'112-39-0': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['112-39-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_69187']; candidate_pubchem_cids=[8181, 94864]; selected_pubchem_cids=[8181]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
17,597 bootstrap_labels prefLabel [{"@value":"methyl palmitate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… Bootstrapped prefLabel from legacy name field
17,598 bootstrap_labels name methyl palmitate Purged legacy name field to enforce prefLabel usage
17,599 bootstrap_labels synonyms ["organic","methylpalmitate","ce-1698","dubpm","palmereâ?¢m1680","palmereâ?¢m1695h","palmereâ?¢m1698","radia7120"] [] Removed legacy synonyms field in favor of structured labels
73,808 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
73,809 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
219,103 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,123 normalize_name_case prefLabel [{"@value":"methyl palmitate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… [{"@value":"Methyl Palmitate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
243,665 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H34O2"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
243,666 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
243,667 enrich_references references [] [{"@id":"chemidplus:0000112390","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributed… Added references with provenance; cas_numbers=['112-39-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_69187']; candidate_pubchem_cids=[8181, 94864]; selected_pubchem_cids=[8181]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
256,694 chebi_altlabels altLabel [] [{"@value":"Hexadecanoate methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
268,901 consensus_match altLabel [{"@value":"Hexadecanoate methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… [{"@value":"Hexadecanoate methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… group_key=methylpalmitate||dimension=Environmental > media=Water > water_body=Long-term; cas=112-39-0; added Common Chemistry CAS names as altLabel: <em>n</em>-Hexadecanoic acid methyl ester, Edenor ME C16-98, Edenor ME-C 16-80MY, Emery 2216, Hexadecanoic acid, methyl ester, Metholene 2216, Methyl <em>n</em>-hexadecanoate, NSC 4197, Palmitic acid, methyl ester, Pastell M 16, Radia 7120, Radia 7916, Uniphat A60; object_uuid=fo-0ed0afdfc83ddc0a
268,902 consensus_match cas_match_labels {"112-39-0":"exactMatch"} group_key=methylpalmitate||dimension=Environmental > media=Water > water_body=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'112-39-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-0ed0afdfc83ddc0a: {'112-39-0': 'exactMatch'}
278,269 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H34O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H34O2"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Methyl Palmitate'
285,018 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H34O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H34O2"]… rdkit_post_consensus from 'CCCCCCCCCCCCCCCC(=O)OC'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
290,810 strip_catalogue_altlabels altLabel [{"@value":"Hexadecanoate methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… [{"@value":"Hexadecanoate methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… Removed 5 catalogue altLabel value(s): 'Emery 2216' (trade name), 'Metholene 2216' (trade name), 'NSC 4197' (registry code), 'Radia 7120' (trade name), 'Radia 7916' (trade name)
317,920 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/37ea47f2-edd4-… associations resolved on the elementary layer
392,626 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H34O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H34O2"]… typed the way the ontology types it
401,193 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/17597 prefLabel ef:agent/bootstrap_labels ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v0 ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v1
ef:activity/change/20260822T0600486828500000/17598 name ef:agent/bootstrap_labels ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v1 ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v2
ef:activity/change/20260822T0600486828500000/17599 synonyms ef:agent/bootstrap_labels ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v2 ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v3
ef:activity/change/20260822T0600486828500000/73808 context ef:agent/default_context_mapping ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v3 ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v4
ef:activity/change/20260822T0600486828500000/73809 context_iri ef:agent/default_context_mapping ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v4 ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v5
ef:activity/change/20260822T0600486828500000/219103 unit_iri ef:agent/unit_normalization ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v5 ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v6
ef:activity/change/20260822T0600486828500000/225123 prefLabel ef:agent/normalize_name_case ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v6 ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v7
ef:activity/change/20260822T0600486828500000/243665 properties ef:agent/enrich_references ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v7 ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v8
ef:activity/change/20260822T0600486828500000/243666 skos_definition ef:agent/enrich_references ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v8 ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v9
ef:activity/change/20260822T0600486828500000/243667 references ef:agent/enrich_references ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v9 ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v10
ef:activity/change/20260822T0600486828500000/256694 altLabel ef:agent/chebi_altlabels ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v10 ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v11
ef:activity/change/20260822T0600486828500000/268901 altLabel ef:agent/consensus_match ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v11 ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v12
ef:activity/change/20260822T0600486828500000/268902 cas_match_labels ef:agent/consensus_match ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v12 ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v13
ef:activity/change/20260822T0600486828500000/278269 properties ef:agent/opsin_iupac ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v13 ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v14
ef:activity/change/20260822T0600486828500000/285018 properties ef:agent/rdkit_post_consensus ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v14 ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v15
ef:activity/change/20260822T0600486828500000/290810 altLabel ef:agent/strip_catalogue_altlabels ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v15 ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v16
ef:activity/change/20260822T0600486828500000/317920 concept_associations ef:agent/carry_associations_onto_flows ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v16 ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v17
ef:activity/change/20260822T0600486828500000/392626 properties ef:agent/normalise_property_values ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v17 ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v18
ef:activity/change/20260822T0600486828500000/401193 types ef:agent/link_flows_to_their_substance ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v18 ef:flow/37ea47f2-edd4-4d29-8e96-2d865591b65e/v19

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