Brightway Flows 1.0
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By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 10 catalogue altLabel value(s): 'EL 10' (grade code), 'EL 10 (corrosion inhibitor)' (grade code), 'H 80' (grade code), 'HEXA 80' (grade code), 'KH 8410' (grade code), 'NSC 26346' (registry code), 'NSC 403347' (registry code), 'S 4' (grade code), 'S 4 (heterocycle)' (grade code), 'Thixon 715B' (trade name)
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=100-97-0; cc_chebi_agreed_name='Hexamethylenetetramine'; object_uuid=fo-4787467dbfb1a686
cas_match_labels 1 consensus_match group_key=methenamine||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'100-97-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-4787467dbfb1a686: {'100-97-0': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['100-97-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_6824']; candidate_pubchem_cids=[4101, 18373724, 53414496]; selected_pubchem_cids=[4101]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
20,764 bootstrap_labels prefLabel — [{"@value":"methenamine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"br… Bootstrapped prefLabel from legacy name field
20,765 bootstrap_labels name methenamine — Purged legacy name field to enforce prefLabel usage
21,332 bootstrap_labels synonyms ["hexamethylenetetramine","methenamine","hexamethylenetetramine (aliphatic)","1,3,5,7-tetraazatricyclo[3.3.1.13,7]decan… [] Removed legacy synonyms field in favor of structured labels
74,343 default_context_mapping context — {"dimension":"Environmental","media":"Air","indoor":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
74,344 default_context_mapping context_iri — https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
220,048 unit_normalization unit_iri — https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,799 normalize_name_case prefLabel [{"@value":"methenamine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"br… [{"@value":"Methenamine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"br… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
246,313 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12N4"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
246,314 enrich_references skos_definition — [{"@value":"A polycyclic cage that is adamantane in which the carbon atoms at positions 1, 3, 5 and 7 are replaced by n… Merged ChEBI/PubChem definitions into skos:definition
246,315 enrich_references references [] [{"@id":"drugcentral:3344","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… Added references with provenance; cas_numbers=['100-97-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_6824']; candidate_pubchem_cids=[4101, 18373724, 53414496]; selected_pubchem_cids=[4101]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
253,843 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12N4"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12N4"],… rdkit_pre_consensus from 'C1N2CN3CN1CN(C2)C3'; added: monoisotopic_mass
257,039 chebi_altlabels altLabel [] [{"@value":"1,3,5,7-tetraazaadamantane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… Added 15 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
268,660 consensus_match prefLabel [{"@value":"Methenamine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"br… [{"@value":"Hexamethylenetetramine","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttribu… cas=100-97-0; cc_chebi_agreed_name='Hexamethylenetetramine'; object_uuid=fo-4787467dbfb1a686
268,661 consensus_match altLabel [{"@value":"1,3,5,7-tetraazaadamantane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… [{"@value":"1,3,5,7-tetraazaadamantane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… cas=100-97-0; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-4787467dbfb1a686
268,662 consensus_match altLabel [{"@value":"1,3,5,7-tetraazaadamantane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… [{"@value":"1,3,5,7-tetraazaadamantane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… group_key=methenamine||dimension=Environmental > media=Water > water_body=Unknown; cas=100-97-0; added Common Chemistry CAS names as altLabel: 1,3,5,7-Tetraazatricyclo[3.3.1.1<sup>3,7</sup>]decane, 1,3,5,7-Tetraazatricyclo[3.3.1.1<sup>3,7</sup>]decane (Urotropine), Accelerator H, Aceto HMT, Aminoform, Ammoform, Antihydral, Cohedur H 30, Cystogen, Duirexol, EL 10, EL 10 (corrosion inhibitor), Ekagom H, Formamine, Formin, Formin (heterocycle), H 80, HA, HEXA 80, Heksa K, Herax UTS, Heterin, Hexa, Hexa (vulcanization accelerator), Hexa B, Hexa-Flo-Pulver, Hexaform, Hexamine (heterocycle), Hexamine Superfine, Hexasan, KH 8410, Methenamide, Methenamin, NSC 26346, NSC 403347, Nocceler H, Nocceler H-PO, Nocrac H, Preparation AF, Rhenogran HEXA 80, Rhenogran HEXA 80SBR, S 4, S 4 (heterocycle), Sanceler H, Sanceler HMT, Sanceler HT, Sanceler HT-PO, Thixon 715B, Uramin, Uratrine, Urodeine, Urotropine, Vulkacit H, Vulkacit H 30, Xametrin; object_uuid=fo-4787467dbfb1a686
268,663 consensus_match cas_match_labels — {"100-97-0":"exactMatch"} group_key=methenamine||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'100-97-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-4787467dbfb1a686: {'100-97-0': 'exactMatch'}
279,047 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12N4"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12N4"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '1,3,5,7-tetraazaadamantane'
285,875 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12N4"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12N4"],… rdkit_post_consensus from 'C1N2CN3CN1CN(C2)C3'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,392 strip_catalogue_altlabels altLabel [{"@value":"1,3,5,7-tetraazaadamantane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… [{"@value":"1,3,5,7-tetraazaadamantane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… Removed 10 catalogue altLabel value(s): 'EL 10' (grade code), 'EL 10 (corrosion inhibitor)' (grade code), 'H 80' (grade code), 'HEXA 80' (grade code), 'KH 8410' (grade code), 'NSC 26346' (registry code), 'NSC 403347' (registry code), 'S 4' (grade code), 'S 4 (heterocycle)' (grade code), 'Thixon 715B' (trade name)
318,227 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/38c6b2f9-cae9-… associations resolved on the elementary layer
393,453 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12N4"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12N4"],… typed the way the ontology types it
402,399 link_flows_to_their_substance types — ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20261019T0712047113160000/20764 prefLabel ef:agent/bootstrap_labels ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v0 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v1
ef:activity/change/20261019T0712047113160000/20765 name ef:agent/bootstrap_labels ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v1 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v2
ef:activity/change/20261019T0712047113160000/21332 synonyms ef:agent/bootstrap_labels ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v2 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v3
ef:activity/change/20261019T0712047113160000/74343 context ef:agent/default_context_mapping ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v3 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v4
ef:activity/change/20261019T0712047113160000/74344 context_iri ef:agent/default_context_mapping ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v4 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v5
ef:activity/change/20261019T0712047113160000/220048 unit_iri ef:agent/unit_normalization ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v5 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v6
ef:activity/change/20261019T0712047113160000/225799 prefLabel ef:agent/normalize_name_case ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v6 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v7
ef:activity/change/20261019T0712047113160000/246313 properties ef:agent/enrich_references ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v7 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v8
ef:activity/change/20261019T0712047113160000/246314 skos_definition ef:agent/enrich_references ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v8 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v9
ef:activity/change/20261019T0712047113160000/246315 references ef:agent/enrich_references ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v9 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v10
ef:activity/change/20261019T0712047113160000/253843 properties ef:agent/rdkit_pre_consensus ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v10 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v11
ef:activity/change/20261019T0712047113160000/257039 altLabel ef:agent/chebi_altlabels ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v11 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v12
ef:activity/change/20261019T0712047113160000/268660 prefLabel ef:agent/consensus_match ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v12 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v13
ef:activity/change/20261019T0712047113160000/268661 altLabel ef:agent/consensus_match ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v13 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v14
ef:activity/change/20261019T0712047113160000/268662 altLabel ef:agent/consensus_match ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v14 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v15
ef:activity/change/20261019T0712047113160000/268663 cas_match_labels ef:agent/consensus_match ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v15 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v16
ef:activity/change/20261019T0712047113160000/279047 properties ef:agent/opsin_iupac ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v16 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v17
ef:activity/change/20261019T0712047113160000/285875 properties ef:agent/rdkit_post_consensus ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v17 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v18
ef:activity/change/20261019T0712047113160000/291392 altLabel ef:agent/strip_catalogue_altlabels ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v18 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v19
ef:activity/change/20261019T0712047113160000/318227 concept_associations ef:agent/carry_associations_onto_flows ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v19 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v20
ef:activity/change/20261019T0712047113160000/393453 properties ef:agent/normalise_property_values ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v20 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v21
ef:activity/change/20261019T0712047113160000/402399 types ef:agent/link_flows_to_their_substance ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v21 ef:flow/38c6b2f9-cae9-4d4a-8bc0-dd80ae2b0d67/v22

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