Gallic acid
Everything that changed this flow. Back to the flow
3998a8de-796f-43a7-914a-43de8c029a9e
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 4 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'NSC 20103' (registry code), 'NSC 674319' (registry code) |
| prefLabel | 2 | bootstrap_labels, consensus_match | cas=149-91-7; cc_chebi_agreed_name='Gallic acid'; object_uuid=fo-77c42fbb542bebce |
| cas_match_labels | 1 | consensus_match | group_key=3,4,5-trihydroxybenzoicacid||dimension=Environmental > media=Air > strata=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'149-91-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-77c42fbb542bebce: {'149-91-7': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['149-91-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30778']; candidate_pubchem_cids=[370, 54675821]; selected_pubchem_cids=[370]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 21,381 | bootstrap_labels | prefLabel | — | [{"@value":"3,4,5-trihydroxybenzoicacid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasA… | Bootstrapped prefLabel from legacy name field |
| 21,382 | bootstrap_labels | name | 3,4,5-trihydroxybenzoicacid | — | Purged legacy name field to enforce prefLabel usage |
| 21,383 | bootstrap_labels | synonyms | ["organic","3,4,5-trihydroxybenzoicacid"] | [] | Removed legacy synonyms field in favor of structured labels |
| 74,816 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Long-term"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| 74,817 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-lote | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| 220,206 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 246,745 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H6O5"],"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 246,746 | enrich_references | skos_definition | — | [{"@value":"A trihydroxybenzoic acid in which the hydroxy groups are at positions 3, 4, and 5.","@language":"en","prove… | Merged ChEBI/PubChem definitions into skos:definition |
| 246,747 | enrich_references | references | [] | [{"@id":"gmelin:27336","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… | Added references with provenance; cas_numbers=['149-91-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30778']; candidate_pubchem_cids=[370, 54675821]; selected_pubchem_cids=[370]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 253,962 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H6O5"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H6O5"],"… | rdkit_pre_consensus from 'C1=C(C=C(C(=C1O)O)O)C(=O)O'; added: monoisotopic_mass |
| 257,082 | chebi_altlabels | altLabel | [] | [{"@value":"3,4,5-Trihydroxybenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… | Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 261,514 | consensus_match | prefLabel | [{"@value":"3,4,5-trihydroxybenzoicacid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasA… | [{"@value":"Gallic acid","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"con… | cas=149-91-7; cc_chebi_agreed_name='Gallic acid'; object_uuid=fo-77c42fbb542bebce |
| 261,515 | consensus_match | altLabel | [{"@value":"3,4,5-Trihydroxybenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… | [{"@value":"3,4,5-Trihydroxybenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… | cas=149-91-7; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-77c42fbb542bebce |
| 261,516 | consensus_match | altLabel | [{"@value":"3,4,5-Trihydroxybenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… | [{"@value":"3,4,5-Trihydroxybenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… | group_key=3,4,5-trihydroxybenzoicacid||dimension=Environmental > media=Air > strata=Long-term; cas=149-91-7; added Common Chemistry CAS names as altLabel: 3,4,5-Hydroxybenzoic acid, A 1925-04, BL 20220429008, Benzoic acid, 3,4,5-trihydroxy-, MeSH ID: D005707, NSC 20103, NSC 674319; object_uuid=fo-77c42fbb542bebce |
| 261,517 | consensus_match | cas_match_labels | — | {"149-91-7":"exactMatch"} | group_key=3,4,5-trihydroxybenzoicacid||dimension=Environmental > media=Air > strata=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'149-91-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-77c42fbb542bebce: {'149-91-7': 'exactMatch'} |
| 279,155 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H6O5"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H6O5"],"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Gallic acid' |
| 286,009 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H6O5"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H6O5"],"… | rdkit_post_consensus from 'O=C(O)c1cc(O)c(O)c(O)c1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 291,454 | strip_catalogue_altlabels | altLabel | [{"@value":"3,4,5-Trihydroxybenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… | [{"@value":"3,4,5-Trihydroxybenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… | Removed 2 catalogue altLabel value(s): 'NSC 20103' (registry code), 'NSC 674319' (registry code) |
| 318,424 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/3998a8de-796f-… | associations resolved on the elementary layer |
| 393,542 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H6O5"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H6O5"],"… | typed the way the ontology types it |
| 402,582 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260822T0600486828500000/21381 | prefLabel | ef:agent/bootstrap_labels | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v0 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v1 |
| ef:activity/change/20260822T0600486828500000/21382 | name | ef:agent/bootstrap_labels | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v1 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v2 |
| ef:activity/change/20260822T0600486828500000/21383 | synonyms | ef:agent/bootstrap_labels | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v2 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v3 |
| ef:activity/change/20260822T0600486828500000/74816 | context | ef:agent/default_context_mapping | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v3 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v4 |
| ef:activity/change/20260822T0600486828500000/74817 | context_iri | ef:agent/default_context_mapping | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v4 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v5 |
| ef:activity/change/20260822T0600486828500000/220206 | unit_iri | ef:agent/unit_normalization | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v5 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v6 |
| ef:activity/change/20260822T0600486828500000/246745 | properties | ef:agent/enrich_references | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v6 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v7 |
| ef:activity/change/20260822T0600486828500000/246746 | skos_definition | ef:agent/enrich_references | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v7 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v8 |
| ef:activity/change/20260822T0600486828500000/246747 | references | ef:agent/enrich_references | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v8 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v9 |
| ef:activity/change/20260822T0600486828500000/253962 | properties | ef:agent/rdkit_pre_consensus | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v9 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v10 |
| ef:activity/change/20260822T0600486828500000/257082 | altLabel | ef:agent/chebi_altlabels | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v10 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v11 |
| ef:activity/change/20260822T0600486828500000/261514 | prefLabel | ef:agent/consensus_match | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v11 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v12 |
| ef:activity/change/20260822T0600486828500000/261515 | altLabel | ef:agent/consensus_match | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v12 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v13 |
| ef:activity/change/20260822T0600486828500000/261516 | altLabel | ef:agent/consensus_match | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v13 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v14 |
| ef:activity/change/20260822T0600486828500000/261517 | cas_match_labels | ef:agent/consensus_match | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v14 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v15 |
| ef:activity/change/20260822T0600486828500000/279155 | properties | ef:agent/opsin_iupac | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v15 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v16 |
| ef:activity/change/20260822T0600486828500000/286009 | properties | ef:agent/rdkit_post_consensus | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v16 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v17 |
| ef:activity/change/20260822T0600486828500000/291454 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v17 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v18 |
| ef:activity/change/20260822T0600486828500000/318424 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v18 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v19 |
| ef:activity/change/20260822T0600486828500000/393542 | properties | ef:agent/normalise_property_values | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v19 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v20 |
| ef:activity/change/20260822T0600486828500000/402582 | types | ef:agent/link_flows_to_their_substance | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v20 | ef:flow/3998a8de-796f-43a7-914a-43de8c029a9e/v21 |