M-cresol
Everything that changed this flow. Back to the flow
39a4229a-0ae7-4178-8be1-0a6ef124e790
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 8768' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=m-cresol||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'108-39-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-66e8fa3d688b6152: {'108-39-4': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['108-39-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_17231']; candidate_pubchem_cids=[342, 13394, 201097]; selected_pubchem_cids=[342]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 21,388 | bootstrap_labels | prefLabel | — | [{"@value":"m-cresol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… | Bootstrapped prefLabel from legacy name field |
| 21,389 | bootstrap_labels | name | m-cresol | — | Purged legacy name field to enforce prefLabel usage |
| 21,390 | bootstrap_labels | synonyms | ["m-cresol","3-methylphenol","m-cresol (3-methylphenol)","cresol, 3-","cresol","3-methyl-phenol","methylphenol, 3-","ph… | [] | Removed legacy synonyms field in favor of structured labels |
| 74,848 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","indoor":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| 74,849 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| 220,213 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 225,939 | normalize_name_case | prefLabel | [{"@value":"m-cresol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… | [{"@value":"M-cresol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 246,756 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H8O"],"a… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 246,757 | enrich_references | skos_definition | — | [{"@value":"A cresol with the methyl substituent at position 3. It is a minor urinary metabolite of toluene.","@languag… | Merged ChEBI/PubChem definitions into skos:definition |
| 246,758 | enrich_references | references | [] | [{"@id":"gmelin:101411","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"con… | Added references with provenance; cas_numbers=['108-39-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_17231']; candidate_pubchem_cids=[342, 13394, 201097]; selected_pubchem_cids=[342]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 253,971 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H8O"],"a… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H8O"],"a… | rdkit_pre_consensus from 'CC1=CC(=CC=C1)O'; added: monoisotopic_mass |
| 257,092 | chebi_altlabels | altLabel | [] | [{"@value":"1-hydroxy-3-methylbenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | Added 8 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 268,470 | consensus_match | altLabel | [{"@value":"1-hydroxy-3-methylbenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | [{"@value":"1-hydroxy-3-methylbenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | group_key=m-cresol||dimension=Environmental > media=Air > indoor=Unknown; cas=108-39-4; added Common Chemistry CAS names as altLabel: <em>m</em>-Cresylic acid, <em>m</em>-Hydroxytoluene, <em>m</em>-Oxytoluene, <em>m</em>-Toluol, NSC 8768, Phenol, 3-methyl-; object_uuid=fo-66e8fa3d688b6152 |
| 268,471 | consensus_match | cas_match_labels | — | {"108-39-4":"exactMatch"} | group_key=m-cresol||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'108-39-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-66e8fa3d688b6152: {'108-39-4': 'exactMatch'} |
| 279,176 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H8O"],"a… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H8O"],"a… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'M-cresol' |
| 286,032 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H8O"],"a… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H8O"],"a… | rdkit_post_consensus from 'Cc1cccc(O)c1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 291,478 | strip_catalogue_altlabels | altLabel | [{"@value":"1-hydroxy-3-methylbenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | [{"@value":"1-hydroxy-3-methylbenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | Removed 1 catalogue altLabel value(s): 'NSC 8768' (registry code) |
| 318,460 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/39a4229a-0ae7-… | associations resolved on the elementary layer |
| 393,567 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H8O"],"a… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H8O"],"a… | typed the way the ontology types it |
| 402,608 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 402,609 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24127","rdfs:label":"fungicide","http://www.w3.org/2004/02/skos/core#defi… | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/21388 | prefLabel | ef:agent/bootstrap_labels | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v0 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v1 |
| ef:activity/change/20260820T0738569779880000/21389 | name | ef:agent/bootstrap_labels | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v1 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v2 |
| ef:activity/change/20260820T0738569779880000/21390 | synonyms | ef:agent/bootstrap_labels | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v2 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v3 |
| ef:activity/change/20260820T0738569779880000/74848 | context | ef:agent/default_context_mapping | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v3 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v4 |
| ef:activity/change/20260820T0738569779880000/74849 | context_iri | ef:agent/default_context_mapping | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v4 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v5 |
| ef:activity/change/20260820T0738569779880000/220213 | unit_iri | ef:agent/unit_normalization | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v5 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v6 |
| ef:activity/change/20260820T0738569779880000/225939 | prefLabel | ef:agent/normalize_name_case | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v6 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v7 |
| ef:activity/change/20260820T0738569779880000/246756 | properties | ef:agent/enrich_references | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v7 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v8 |
| ef:activity/change/20260820T0738569779880000/246757 | skos_definition | ef:agent/enrich_references | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v8 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v9 |
| ef:activity/change/20260820T0738569779880000/246758 | references | ef:agent/enrich_references | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v9 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v10 |
| ef:activity/change/20260820T0738569779880000/253971 | properties | ef:agent/rdkit_pre_consensus | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v10 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v11 |
| ef:activity/change/20260820T0738569779880000/257092 | altLabel | ef:agent/chebi_altlabels | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v11 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v12 |
| ef:activity/change/20260820T0738569779880000/268470 | altLabel | ef:agent/consensus_match | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v12 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v13 |
| ef:activity/change/20260820T0738569779880000/268471 | cas_match_labels | ef:agent/consensus_match | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v13 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v14 |
| ef:activity/change/20260820T0738569779880000/279176 | properties | ef:agent/opsin_iupac | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v14 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v15 |
| ef:activity/change/20260820T0738569779880000/286032 | properties | ef:agent/rdkit_post_consensus | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v15 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v16 |
| ef:activity/change/20260820T0738569779880000/291478 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v16 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v17 |
| ef:activity/change/20260820T0738569779880000/318460 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v17 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v18 |
| ef:activity/change/20260820T0738569779880000/393567 | properties | ef:agent/normalise_property_values | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v18 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v19 |
| ef:activity/change/20260820T0738569779880000/402608 | types | ef:agent/link_flows_to_their_substance | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v19 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v20 |
| ef:activity/change/20260820T0738569779880000/402609 | roles | ef:agent/link_flows_to_their_substance | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v20 | ef:flow/39a4229a-0ae7-4178-8be1-0a6ef124e790/v21 |