Picolinic acid
Everything that changed this flow. Back to the flow
3b2fd56b-d3be-4f63-a741-74817cbddd90
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 4 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'NSC 171' (registry code), 'PCL 016' (grade code) |
| prefLabel | 3 | bootstrap_labels, consensus_match, normalize_name_case | cas=98-98-6; cc_chebi_agreed_name='Picolinic acid'; object_uuid=fo-664bb5188b574385 |
| cas_match_labels | 1 | consensus_match | group_key=pyridine-2-carboxylicacid||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'98-98-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-664bb5188b574385: {'98-98-6': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['98-98-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28747']; candidate_pubchem_cids=[849, 1018, 71559, 6920223]; selected_pubchem_cids=[1018]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
22| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 4,871 | bootstrap_labels | prefLabel | — | [{"@value":"pyridine-2-carboxylic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAt… | Bootstrapped prefLabel from legacy name field |
| 4,872 | bootstrap_labels | name | pyridine-2-carboxylic acid | — | Purged legacy name field to enforce prefLabel usage |
| 4,873 | bootstrap_labels | synonyms | [".alpha.-Pyridinecarboxylic acid","2-Carboxypyridine","2-Picolinic acid","2-Pyridinecarboxylic acid","2-pyridine carbo… | [] | Removed legacy synonyms field in favor of structured labels |
| 75,778 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 75,779 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 214,966 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 222,216 | normalize_name_case | prefLabel | [{"@value":"pyridine-2-carboxylic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAt… | [{"@value":"Pyridine-2-carboxylic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAt… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 231,858 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H5NO2"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 231,859 | enrich_references | skos_definition | — | [{"@value":"A pyridinemonocarboxylic acid in which the carboxy group is located at position 2. It is an intermediate in… | Merged ChEBI/PubChem definitions into skos:definition |
| 231,860 | enrich_references | references | [] | [{"@id":"gmelin:3318","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… | Added references with provenance; cas_numbers=['98-98-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28747']; candidate_pubchem_cids=[849, 1018, 71559, 6920223]; selected_pubchem_cids=[1018]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 249,660 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H5NO2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H5NO2"],… | rdkit_pre_consensus from 'C1=CC=NC(=C1)C(=O)O'; added: monoisotopic_mass |
| 254,994 | chebi_altlabels | altLabel | [] | [{"@value":"2-Picolinic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… | Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 271,217 | consensus_match | prefLabel | [{"@value":"Pyridine-2-carboxylic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAt… | [{"@value":"Picolinic acid","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"… | cas=98-98-6; cc_chebi_agreed_name='Picolinic acid'; object_uuid=fo-664bb5188b574385 |
| 271,218 | consensus_match | altLabel | [{"@value":"2-Picolinic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… | [{"@value":"2-Picolinic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… | cas=98-98-6; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-664bb5188b574385 |
| 271,219 | consensus_match | altLabel | [{"@value":"2-Picolinic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… | [{"@value":"2-Picolinic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… | group_key=pyridine-2-carboxylicacid||dimension=Environmental > media=Ground > geography=Agricultural; cas=98-98-6; added Common Chemistry CAS names as altLabel: 2-Pyridylcarboxylic acid, NSC 171, PCL 016, α-Pyridinecarboxylic acid; object_uuid=fo-664bb5188b574385 |
| 271,220 | consensus_match | cas_match_labels | — | {"98-98-6":"exactMatch"} | group_key=pyridine-2-carboxylicacid||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'98-98-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-664bb5188b574385: {'98-98-6': 'exactMatch'} |
| 274,793 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H5NO2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H5NO2"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Picolinic acid' |
| 281,263 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H5NO2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H5NO2"],… | rdkit_post_consensus from 'O=C(O)c1ccccn1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 288,257 | strip_catalogue_altlabels | altLabel | [{"@value":"2-Picolinic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… | [{"@value":"2-Picolinic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… | Removed 2 catalogue altLabel value(s): 'NSC 171' (registry code), 'PCL 016' (grade code) |
| 318,904 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/3b2fd56b-d3be-… | associations resolved on the elementary layer |
| 389,102 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H5NO2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H5NO2"],… | typed the way the ontology types it |
| 396,116 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
22 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/4871 | prefLabel | ef:agent/bootstrap_labels | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v0 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v1 |
| ef:activity/change/20260821T1554374006150000/4872 | name | ef:agent/bootstrap_labels | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v1 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v2 |
| ef:activity/change/20260821T1554374006150000/4873 | synonyms | ef:agent/bootstrap_labels | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v2 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v3 |
| ef:activity/change/20260821T1554374006150000/75778 | context | ef:agent/default_context_mapping | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v3 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v4 |
| ef:activity/change/20260821T1554374006150000/75779 | context_iri | ef:agent/default_context_mapping | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v4 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v5 |
| ef:activity/change/20260821T1554374006150000/214966 | unit_iri | ef:agent/unit_normalization | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v5 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v6 |
| ef:activity/change/20260821T1554374006150000/222216 | prefLabel | ef:agent/normalize_name_case | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v6 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v7 |
| ef:activity/change/20260821T1554374006150000/231858 | properties | ef:agent/enrich_references | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v7 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v8 |
| ef:activity/change/20260821T1554374006150000/231859 | skos_definition | ef:agent/enrich_references | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v8 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v9 |
| ef:activity/change/20260821T1554374006150000/231860 | references | ef:agent/enrich_references | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v9 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v10 |
| ef:activity/change/20260821T1554374006150000/249660 | properties | ef:agent/rdkit_pre_consensus | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v10 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v11 |
| ef:activity/change/20260821T1554374006150000/254994 | altLabel | ef:agent/chebi_altlabels | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v11 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v12 |
| ef:activity/change/20260821T1554374006150000/271217 | prefLabel | ef:agent/consensus_match | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v12 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v13 |
| ef:activity/change/20260821T1554374006150000/271218 | altLabel | ef:agent/consensus_match | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v13 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v14 |
| ef:activity/change/20260821T1554374006150000/271219 | altLabel | ef:agent/consensus_match | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v14 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v15 |
| ef:activity/change/20260821T1554374006150000/271220 | cas_match_labels | ef:agent/consensus_match | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v15 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v16 |
| ef:activity/change/20260821T1554374006150000/274793 | properties | ef:agent/opsin_iupac | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v16 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v17 |
| ef:activity/change/20260821T1554374006150000/281263 | properties | ef:agent/rdkit_post_consensus | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v17 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v18 |
| ef:activity/change/20260821T1554374006150000/288257 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v18 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v19 |
| ef:activity/change/20260821T1554374006150000/318904 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v19 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v20 |
| ef:activity/change/20260821T1554374006150000/389102 | properties | ef:agent/normalise_property_values | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v20 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v21 |
| ef:activity/change/20260821T1554374006150000/396116 | types | ef:agent/link_flows_to_their_substance | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v21 | ef:flow/3b2fd56b-d3be-4f63-a741-74817cbddd90/v22 |