Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'U 238' (grade code)
prefLabel 3 bootstrap_labels, flow_layers.pubchem_element_enrichment, normalize_name_case element name from the flow object: Uranium
cas_match_labels 1 consensus_match group_key=uranium||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-61-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-93d10c394b58394e: {'7440-61-1': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable energy resources from ground
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable energy resources from ground
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 231-170-6 from CAS 7440-61-1
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7440-61-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_27214']; candidate_pubchem_cids=[23989, 9964722]; selected_pubchem_cids=[]; formula_similarity_expected=['U']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'MJ'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

23
# Step Field From To Why
21,733 bootstrap_labels prefLabel [{"@value":"uranium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… Bootstrapped prefLabel from legacy name field
21,734 bootstrap_labels name uranium Purged legacy name field to enforce prefLabel usage
21,735 bootstrap_labels synonyms ["(232u)uranium","(236u)uranium","238U","238U Element","92U","AC1L2N4T","Depleted Uranium","KST-1A1354","KST-1A1399","U… [] Removed legacy synonyms field in favor of structured labels
78,102 default_context_mapping context {"dimension":"Resource","media":"Ground"} Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable energy resources from ground
78,103 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/reso-grou Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable energy resources from ground
220,305 unit_normalization unit_iri https://vocab.brightway.one/units/unit/MegaJ Unit IRI set from normalization of 'MJ'
226,011 normalize_name_case prefLabel [{"@value":"uranium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… [{"@value":"Uranium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
226,925 ec_cross_check ec_numbers [] ["231-170-6"] Resolved from EC-inventory: 231-170-6 from CAS 7440-61-1
236,308 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["U"],"attes… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=0)
236,309 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
236,310 enrich_references references [] [{"@id":"https://commonchemistry.cas.org/detail?cas_rn=7440-61-1","provenance":{"prov:wasGeneratedBy":"enrich_reference… Added references with provenance; cas_numbers=['7440-61-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_27214']; candidate_pubchem_cids=[23989, 9964722]; selected_pubchem_cids=[]; formula_similarity_expected=['U']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,944 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["U"],"attes… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["U"],"attes… rdkit_pre_consensus from '[U]'; added: monoisotopic_mass
255,754 chebi_altlabels altLabel [] [{"@value":"92U","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
273,209 consensus_match altLabel [{"@value":"92U","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… [{"@value":"92U","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… group_key=uranium||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); cas=7440-61-1; added Common Chemistry CAS names as altLabel: <sup>238</sup>U, <sup>238</sup>U element, MeSH ID: D014501, U 238, U element, Uranium I (<sup>238</sup>U), Uranium, isotope of mass 238, Uranium-238; object_uuid=fo-93d10c394b58394e
273,210 consensus_match cas_match_labels {"7440-61-1":"exactMatch"} group_key=uranium||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-61-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-93d10c394b58394e: {'7440-61-1': 'exactMatch'}
276,146 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["U"],"attes… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["U"],"attes… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Uranium'
282,720 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["U"],"attes… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["U"],"attes… rdkit_post_consensus from '[U]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,272 strip_catalogue_altlabels altLabel [{"@value":"92U","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… [{"@value":"92U","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… Removed 1 catalogue altLabel value(s): 'U 238' (grade code)
320,085 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/3e4d2966-6556-… associations resolved on the elementary layer
390,490 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["U"],"attes… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["U"],"attes… typed the way the ontology types it
398,115 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalElement"] the substance's answer, copied onto its flow
398,116 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["U"],"attes… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["U"],"attes… the substance's answer, copied onto its flow
403,824 flow_layers.pubchem_element_enrichment prefLabel [{"@value":"Uranium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… [{"@value":"Uranium","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_enrichm… element name from the flow object: Uranium

PROV-O trail

23 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/21733 prefLabel ef:agent/bootstrap_labels ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v0 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v1
ef:activity/change/20260820T0738569779880000/21734 name ef:agent/bootstrap_labels ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v1 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v2
ef:activity/change/20260820T0738569779880000/21735 synonyms ef:agent/bootstrap_labels ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v2 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v3
ef:activity/change/20260820T0738569779880000/78102 context ef:agent/default_context_mapping ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v3 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v4
ef:activity/change/20260820T0738569779880000/78103 context_iri ef:agent/default_context_mapping ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v4 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v5
ef:activity/change/20260820T0738569779880000/220305 unit_iri ef:agent/unit_normalization ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v5 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v6
ef:activity/change/20260820T0738569779880000/226011 prefLabel ef:agent/normalize_name_case ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v6 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v7
ef:activity/change/20260820T0738569779880000/226925 ec_numbers ef:agent/ec_cross_check ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v7 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v8
ef:activity/change/20260820T0738569779880000/236308 properties ef:agent/enrich_references ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v8 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v9
ef:activity/change/20260820T0738569779880000/236309 skos_definition ef:agent/enrich_references ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v9 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v10
ef:activity/change/20260820T0738569779880000/236310 references ef:agent/enrich_references ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v10 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v11
ef:activity/change/20260820T0738569779880000/250944 properties ef:agent/rdkit_pre_consensus ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v11 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v12
ef:activity/change/20260820T0738569779880000/255754 altLabel ef:agent/chebi_altlabels ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v12 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v13
ef:activity/change/20260820T0738569779880000/273209 altLabel ef:agent/consensus_match ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v13 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v14
ef:activity/change/20260820T0738569779880000/273210 cas_match_labels ef:agent/consensus_match ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v14 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v15
ef:activity/change/20260820T0738569779880000/276146 properties ef:agent/opsin_iupac ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v15 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v16
ef:activity/change/20260820T0738569779880000/282720 properties ef:agent/rdkit_post_consensus ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v16 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v17
ef:activity/change/20260820T0738569779880000/289272 altLabel ef:agent/strip_catalogue_altlabels ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v17 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v18
ef:activity/change/20260820T0738569779880000/320085 concept_associations ef:agent/carry_associations_onto_flows ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v18 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v19
ef:activity/change/20260820T0738569779880000/390490 properties ef:agent/normalise_property_values ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v19 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v20
ef:activity/change/20260820T0738569779880000/398115 types ef:agent/link_flows_to_their_substance ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v20 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v21
ef:activity/change/20260820T0738569779880000/398116 properties ef:agent/link_flows_to_their_substance ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v21 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v22
ef:activity/change/20260820T0738569779880000/403824 prefLabel ef:agent/flow_layers.pubchem_element_enrichment ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v22 ef:flow/3e4d2966-6556-11dd-ad8b-0800200c9a66/v23

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