Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'S-3349' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=tolclofos-methyl||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'57018-04-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-c7a7343cd3d45898: {'57018-04-9': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['57018-04-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_81731']; candidate_pubchem_cids=[91664]; selected_pubchem_cids=[91664]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
483 bootstrap_labels prefLabel [{"@value":"tolclofos-methyl","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… Bootstrapped prefLabel from legacy name field
484 bootstrap_labels name tolclofos-methyl Purged legacy name field to enforce prefLabel usage
8,158 bootstrap_labels synonyms ["(O,O-dimethyl O-(2,6-dichloro-4-methylphenyl)phosphorothioate)","AC-12691","AC1L3MJA","AC1Q3M2D","O,O-Dimethyl O-(2,6… [] Removed legacy synonyms field in favor of structured labels
78,308 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Aircraft cruise height"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
78,309 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-aicrhe Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
213,494 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,200 normalize_name_case prefLabel [{"@value":"tolclofos-methyl","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… [{"@value":"Tolclofos-methyl","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
227,622 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H11Cl2O3… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
227,623 enrich_references skos_definition [{"@value":"An organic thiophosphate that is 2,6-dichloro-4-methylphenol in which the hydrogen of the hydroxy group gro… Merged ChEBI/PubChem definitions into skos:definition
227,624 enrich_references references [] [{"@id":"agr:IND87036376","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"c… Added references with provenance; cas_numbers=['57018-04-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_81731']; candidate_pubchem_cids=[91664]; selected_pubchem_cids=[91664]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,438 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H11Cl2O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H11Cl2O3… rdkit_pre_consensus from 'CC1=CC(=C(C(=C1)Cl)OP(=S)(OC)OC)Cl'; added: monoisotopic_mass
254,439 chebi_altlabels altLabel [] [{"@value":"Basilex","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
272,672 consensus_match altLabel [{"@value":"Basilex","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"Basilex","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… group_key=tolclofos-methyl||dimension=Environmental > media=Air > indoor=Unknown; cas=57018-04-9; added Common Chemistry CAS names as altLabel: <em>O</em>,<em>O</em>-Dimethyl <em>O</em>-(2,6-dichloro-4-methylphenyl) phosphorothioate, Phosphorothioic acid, <em>O</em>-(2,6-dichloro-4-methylphenyl) <em>O</em>,<em>O</em>-dimethyl ester, Rhizolex, Rhizolex T 50, Tolclophos-methyl; object_uuid=fo-c7a7343cd3d45898
272,673 consensus_match cas_match_labels {"57018-04-9":"exactMatch"} group_key=tolclofos-methyl||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'57018-04-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-c7a7343cd3d45898: {'57018-04-9': 'exactMatch'}
273,561 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H11Cl2O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H11Cl2O3… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'O-(2,6-dichloro-4-methylphenyl) O,O-dimethyl phosphorothioate'
279,921 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H11Cl2O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H11Cl2O3… rdkit_post_consensus from 'COP(=S)(OC)Oc1c(Cl)cc(C)cc1Cl'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
287,338 strip_catalogue_altlabels altLabel [{"@value":"Basilex","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"Basilex","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… Removed 1 catalogue altLabel value(s): 'S-3349' (grade code)
320,161 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/3e4d7780-6556-… associations resolved on the elementary layer
387,833 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H11Cl2O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H11Cl2O3… typed the way the ontology types it
394,347 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
394,348 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_33286","rdfs:label":"agrochemical","http://www.w3.org/2004/02/skos/core#d… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1812399309960000/483 prefLabel ef:agent/bootstrap_labels ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v0 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v1
ef:activity/change/20260820T1812399309960000/484 name ef:agent/bootstrap_labels ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v1 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v2
ef:activity/change/20260820T1812399309960000/8158 synonyms ef:agent/bootstrap_labels ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v2 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v3
ef:activity/change/20260820T1812399309960000/78308 context ef:agent/default_context_mapping ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v3 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v4
ef:activity/change/20260820T1812399309960000/78309 context_iri ef:agent/default_context_mapping ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v4 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v5
ef:activity/change/20260820T1812399309960000/213494 unit_iri ef:agent/unit_normalization ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v5 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v6
ef:activity/change/20260820T1812399309960000/221200 prefLabel ef:agent/normalize_name_case ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v6 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v7
ef:activity/change/20260820T1812399309960000/227622 properties ef:agent/enrich_references ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v7 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v8
ef:activity/change/20260820T1812399309960000/227623 skos_definition ef:agent/enrich_references ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v8 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v9
ef:activity/change/20260820T1812399309960000/227624 references ef:agent/enrich_references ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v9 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v10
ef:activity/change/20260820T1812399309960000/248438 properties ef:agent/rdkit_pre_consensus ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v10 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v11
ef:activity/change/20260820T1812399309960000/254439 altLabel ef:agent/chebi_altlabels ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v11 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v12
ef:activity/change/20260820T1812399309960000/272672 altLabel ef:agent/consensus_match ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v12 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v13
ef:activity/change/20260820T1812399309960000/272673 cas_match_labels ef:agent/consensus_match ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v13 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v14
ef:activity/change/20260820T1812399309960000/273561 properties ef:agent/opsin_iupac ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v14 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v15
ef:activity/change/20260820T1812399309960000/279921 properties ef:agent/rdkit_post_consensus ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v15 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v16
ef:activity/change/20260820T1812399309960000/287338 altLabel ef:agent/strip_catalogue_altlabels ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v16 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v17
ef:activity/change/20260820T1812399309960000/320161 concept_associations ef:agent/carry_associations_onto_flows ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v17 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v18
ef:activity/change/20260820T1812399309960000/387833 properties ef:agent/normalise_property_values ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v18 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v19
ef:activity/change/20260820T1812399309960000/394347 types ef:agent/link_flows_to_their_substance ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v19 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v20
ef:activity/change/20260820T1812399309960000/394348 roles ef:agent/link_flows_to_their_substance ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v20 ef:flow/3e4d7780-6556-11dd-ad8b-0800200c9a66/v21

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