Malachite green
Everything that changed this flow. Back to the flow
3e839d12-8968-4df8-99d0-f4a88b28f91a
By field
15 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 4 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 5 catalogue altLabel value(s): 'Basonyl Green 830' (trade name), 'C.I. 4200' (registry code), 'C.I. 42000' (registry code), 'CI 42000' (registry code), 'LC 6220' (grade code) |
| prefLabel | 3 | bootstrap_labels, consensus_match, normalize_name_case | cas=569-64-2; cc_chebi_agreed_name='Malachite green'; object_uuid=fo-4d58da42c9c3ee93 |
| cas_match_labels | 1 | consensus_match | group_key=[4-[α-[4-(dimethylamino)phenyl]benzylidene]cyclohexa-2,5-dien-1-ylidene]dimethylammoniumchloride||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory']; cas_sources={'569-64-2': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-4d58da42c9c3ee93: {'569-64-2': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| ec_numbers | 1 | ec_cross_check | Resolved from EC-inventory: 209-322-8 from CAS 569-64-2 |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['569-64-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_72449']; candidate_pubchem_cids=[11294]; selected_pubchem_cids=[11294]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
24| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 10,093 | bootstrap_labels | prefLabel | — | [{"@value":"[4-[α-[4-(dimethylamino)phenyl]benzylidene]cyclohexa-2,5-dien-1-ylidene]dimethylammonium chloride","@langua… | Bootstrapped prefLabel from legacy name field |
| 10,094 | bootstrap_labels | name | [4-[α-[4-(dimethylamino)phenyl]benzylidene]cyclohexa-2,5-dien-1-ylidene]dimethylammonium chloride | — | Purged legacy name field to enforce prefLabel usage |
| 10,095 | bootstrap_labels | synonyms | ["(4-(4-Dimethylaminobenzhydriylidene)cyclohexa-2,5-dienylidene)dimethylammonium chloride","(4-(alpha-(4-(Dimethylamino… | [] | Removed legacy synonyms field in favor of structured labels |
| 78,702 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","indoor":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| 78,703 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| 216,691 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 223,455 | normalize_name_case | prefLabel | [{"@value":"[4-[α-[4-(dimethylamino)phenyl]benzylidene]cyclohexa-2,5-dien-1-ylidene]dimethylammonium chloride","@langua… | [{"@value":"[4-[α-[4-(dimethylamino)phenyl]benzylidene]cyclohexa-2,5-dien-1-ylidene]dimethylammonium Chloride","@langua… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 226,919 | ec_cross_check | ec_numbers | [] | ["209-322-8"] | Resolved from EC-inventory: 209-322-8 from CAS 569-64-2 |
| 236,817 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C23H25ClN2… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 236,818 | enrich_references | skos_definition | — | [{"@value":"An organic chloride salt that is the monochloride salt of malachite green cation. Used as a green-coloured… | Merged ChEBI/PubChem definitions into skos:definition |
| 236,819 | enrich_references | references | [] | [{"@id":"https://chem.echa.europa.eu/100.008.476","provenance":{"prov:wasGeneratedBy":"enrich_references.pubchem_identi… | Added references with provenance; cas_numbers=['569-64-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_72449']; candidate_pubchem_cids=[11294]; selected_pubchem_cids=[11294]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 251,089 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C23H25ClN2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C23H25ClN2… | rdkit_pre_consensus from 'CN(C)C1=CC=C(C=C1)C(=C2C=CC(=[N+](C)C)C=C2)C3=CC=CC=C3.[Cl-]'; added: monoisotopic_mass |
| 255,818 | chebi_altlabels | altLabel | [] | [{"@value":"(4-(4-Dimethylaminobenzhydriylidene)cyclohexa-2,5-dienylidene)dimethylammonium chloride","@language":"en","… | Added 12 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 263,445 | consensus_match | prefLabel | [{"@value":"[4-[α-[4-(dimethylamino)phenyl]benzylidene]cyclohexa-2,5-dien-1-ylidene]dimethylammonium Chloride","@langua… | [{"@value":"Malachite green","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":… | cas=569-64-2; cc_chebi_agreed_name='Malachite green'; object_uuid=fo-4d58da42c9c3ee93 |
| 263,446 | consensus_match | altLabel | [{"@value":"(4-(4-Dimethylaminobenzhydriylidene)cyclohexa-2,5-dienylidene)dimethylammonium chloride","@language":"en","… | [{"@value":"(4-(4-Dimethylaminobenzhydriylidene)cyclohexa-2,5-dienylidene)dimethylammonium chloride","@language":"en","… | cas=569-64-2; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-4d58da42c9c3ee93 |
| 263,447 | consensus_match | altLabel | [{"@value":"(4-(4-Dimethylaminobenzhydriylidene)cyclohexa-2,5-dienylidene)dimethylammonium chloride","@language":"en","… | [{"@value":"(4-(4-Dimethylaminobenzhydriylidene)cyclohexa-2,5-dienylidene)dimethylammonium chloride","@language":"en","… | group_key=[4-[α-[4-(dimethylamino)phenyl]benzylidene]cyclohexa-2,5-dien-1-ylidene]dimethylammoniumchloride||dimension=Environmental > media=Water > water_body=Ocean; cas=569-64-2; added Common Chemistry CAS names as altLabel: ADC Malachite Green Crystals, Acryl Brilliant Green B, Aizen Malachite Green, Aizen Malachite Green Crystals, Aizen malachite green liquid, Aniline green, Astra Malachite Green, Astra Malachite Green B, Astra Malachite Green BXX, Astrazon Green M, Atlantic Malachite Green, Basacryl Green X-BF, Basic Light Green G 4, Basonyl Green 830, Basonyl Green NB 832, Benzal Green, Benzaldehyde green, Bronze Green Toner A 8002, Burma Green B, C.I. 4200, Calcozine Green V, China Green, Diabasic Malachite Green, Diamond Green B extra, Diamond Green BX, Diamond Green P Extra, Green MX, Green Malaquite, Grenoble Green, Hidaco Malachite Green Base, Hidaco Malachite Green LC, Hidaco Malachite Green SC, LC 6220, Light Green N, Lincoln Green Toner B 15-2900, MKG, Malachite Green 4, Malachite Green A, Malachite Green AN, Malachite Green B, Malachite Green CP, Malachite Green Crystals, Malachite Green Crystals BPC, Malachite Green J 3E, Malachite Green Powder, Malachite Green WS, Malachite Green XLS, Malachite Lake Green A, Methanaminium, <em>N</em>-[4-[[4-(dimethylamino)phenyl]phenylmethylene]-2,5-cyclohexadien-1-ylidene]-<em>N</em>-methyl-, chloride, Methanaminium, <em>N</em>-[4-[[4-(dimethylamino)phenyl]phenylmethylene]-2,5-cyclohexadien-1-ylidene]-<em>N</em>-methyl-, chloride (1:1), Mitsui Malachite Green, New Victoria Green Extra I, New Victoria Green Extra II, New Victoria Green Extra O, Oji Malachite Green, Solid Green Crystals O, Solid Green O, Super Ick Cure, Tertrophene Green M, Tokyo Aniline Malachite Green, Verona Basic Green M, Victoria Green, Victoria Green (basic dye), Victoria Green S, Victoria Green WB, Victoria Green WPB; object_uuid=fo-4d58da42c9c3ee93 |
| 263,448 | consensus_match | cas_match_labels | — | {"569-64-2":"exactMatch"} | group_key=[4-[α-[4-(dimethylamino)phenyl]benzylidene]cyclohexa-2,5-dien-1-ylidene]dimethylammoniumchloride||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory']; cas_sources={'569-64-2': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-4d58da42c9c3ee93: {'569-64-2': 'exactMatch'} |
| 276,273 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C23H25ClN2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C23H25ClN2… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '4-{[4-(dimethylamino)phenyl](phenyl)methylene}-N,N-dimethylcyclohexa-2,5-dien-1-iminium chloride' |
| 282,863 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C23H25ClN2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C23H25ClN2… | rdkit_post_consensus from 'CN(C)c1ccc(C(=C2C=CC(=[N+](C)C)C=C2)c2ccccc2)cc1.[Cl-]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 289,360 | strip_catalogue_altlabels | altLabel | [{"@value":"(4-(4-Dimethylaminobenzhydriylidene)cyclohexa-2,5-dienylidene)dimethylammonium chloride","@language":"en","… | [{"@value":"(4-(4-Dimethylaminobenzhydriylidene)cyclohexa-2,5-dienylidene)dimethylammonium chloride","@language":"en","… | Removed 5 catalogue altLabel value(s): 'Basonyl Green 830' (trade name), 'C.I. 4200' (registry code), 'C.I. 42000' (registry code), 'CI 42000' (registry code), 'LC 6220' (grade code) |
| 320,365 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/3e839d12-8968-… | associations resolved on the elementary layer |
| 390,620 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C23H25ClN2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C23H25ClN2… | typed the way the ontology types it |
| 398,304 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/ChemicalSalt"] | the substance's answer, copied onto its flow |
| 398,305 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_78298","rdfs:label":"environmental contaminant","http://www.w3.org/2004/0… | the substance's answer, copied onto its flow |
PROV-O trail
24 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260822T0600486828500000/10093 | prefLabel | ef:agent/bootstrap_labels | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v0 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v1 |
| ef:activity/change/20260822T0600486828500000/10094 | name | ef:agent/bootstrap_labels | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v1 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v2 |
| ef:activity/change/20260822T0600486828500000/10095 | synonyms | ef:agent/bootstrap_labels | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v2 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v3 |
| ef:activity/change/20260822T0600486828500000/78702 | context | ef:agent/default_context_mapping | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v3 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v4 |
| ef:activity/change/20260822T0600486828500000/78703 | context_iri | ef:agent/default_context_mapping | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v4 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v5 |
| ef:activity/change/20260822T0600486828500000/216691 | unit_iri | ef:agent/unit_normalization | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v5 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v6 |
| ef:activity/change/20260822T0600486828500000/223455 | prefLabel | ef:agent/normalize_name_case | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v6 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v7 |
| ef:activity/change/20260822T0600486828500000/226919 | ec_numbers | ef:agent/ec_cross_check | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v7 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v8 |
| ef:activity/change/20260822T0600486828500000/236817 | properties | ef:agent/enrich_references | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v8 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v9 |
| ef:activity/change/20260822T0600486828500000/236818 | skos_definition | ef:agent/enrich_references | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v9 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v10 |
| ef:activity/change/20260822T0600486828500000/236819 | references | ef:agent/enrich_references | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v10 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v11 |
| ef:activity/change/20260822T0600486828500000/251089 | properties | ef:agent/rdkit_pre_consensus | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v11 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v12 |
| ef:activity/change/20260822T0600486828500000/255818 | altLabel | ef:agent/chebi_altlabels | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v12 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v13 |
| ef:activity/change/20260822T0600486828500000/263445 | prefLabel | ef:agent/consensus_match | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v13 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v14 |
| ef:activity/change/20260822T0600486828500000/263446 | altLabel | ef:agent/consensus_match | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v14 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v15 |
| ef:activity/change/20260822T0600486828500000/263447 | altLabel | ef:agent/consensus_match | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v15 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v16 |
| ef:activity/change/20260822T0600486828500000/263448 | cas_match_labels | ef:agent/consensus_match | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v16 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v17 |
| ef:activity/change/20260822T0600486828500000/276273 | properties | ef:agent/opsin_iupac | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v17 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v18 |
| ef:activity/change/20260822T0600486828500000/282863 | properties | ef:agent/rdkit_post_consensus | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v18 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v19 |
| ef:activity/change/20260822T0600486828500000/289360 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v19 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v20 |
| ef:activity/change/20260822T0600486828500000/320365 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v20 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v21 |
| ef:activity/change/20260822T0600486828500000/390620 | properties | ef:agent/normalise_property_values | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v21 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v22 |
| ef:activity/change/20260822T0600486828500000/398304 | types | ef:agent/link_flows_to_their_substance | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v22 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v23 |
| ef:activity/change/20260822T0600486828500000/398305 | roles | ef:agent/link_flows_to_their_substance | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v23 | ef:flow/3e839d12-8968-4df8-99d0-f4a88b28f91a/v24 |