Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 404119' (registry code)
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=590-86-3; cc_chebi_agreed_name='3-Methylbutanal'; object_uuid=fo-afd3a89e7a65c37c
cas_match_labels 1 consensus_match group_key=isovaleraldehyde||dimension=Environmental > media=Air > strata=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'590-86-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-afd3a89e7a65c37c: {'590-86-3': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['590-86-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16638']; candidate_pubchem_cids=[11552, 93643, 87397125]; selected_pubchem_cids=[11552]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
994 bootstrap_labels prefLabel [{"@value":"isovaleraldehyde","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… Bootstrapped prefLabel from legacy name field
995 bootstrap_labels name isovaleraldehyde Purged legacy name field to enforce prefLabel usage
996 bootstrap_labels synonyms [".beta.-Methylbutanal","1-Butanal, 3-methyl-","2-Methylbutanal-4","3-Methyl butyraldehyde","3-Methyl-1-butanal","3-Met… [] Removed legacy synonyms field in favor of structured labels
80,250 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
80,251 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
213,666 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,324 normalize_name_case prefLabel [{"@value":"isovaleraldehyde","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… [{"@value":"Isovaleraldehyde","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
228,124 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H10O"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
228,125 enrich_references skos_definition [{"@value":"A methylbutanal that is butanal substituted by a methyl group at position 3. It occurs as a volatile consti… Merged ChEBI/PubChem definitions into skos:definition
228,126 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J6.754G","provenance":{"prov:wasGeneratedBy":"enrich_reference… Added references with provenance; cas_numbers=['590-86-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16638']; candidate_pubchem_cids=[11552, 93643, 87397125]; selected_pubchem_cids=[11552]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,585 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H10O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H10O"],"… rdkit_pre_consensus from 'CC(C)CC=O'; added: monoisotopic_mass
254,502 chebi_altlabels altLabel [] [{"@value":"3-Methylbutanal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
268,221 consensus_match prefLabel [{"@value":"Isovaleraldehyde","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… [{"@value":"3-Methylbutanal","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":… cas=590-86-3; cc_chebi_agreed_name='3-Methylbutanal'; object_uuid=fo-afd3a89e7a65c37c
268,222 consensus_match altLabel [{"@value":"3-Methylbutanal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… [{"@value":"3-methylbutyraldehyde","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… cas=590-86-3; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-afd3a89e7a65c37c
268,223 consensus_match altLabel [{"@value":"3-methylbutyraldehyde","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… [{"@value":"3-methylbutyraldehyde","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… group_key=isovaleraldehyde||dimension=Environmental > media=Air > strata=Long-term; cas=590-86-3; added Common Chemistry CAS names as altLabel: 3-Methyl-1-butanal, <em>iso</em>-Valeraldehyde, Butanal, 3-methyl-, Butyraldehyde, 3-methyl-, Isoamylaldehyde, Isopentanal, Isovaleric aldehyde, NSC 404119, β-Methylbutanal; object_uuid=fo-afd3a89e7a65c37c
268,224 consensus_match cas_match_labels {"590-86-3":"exactMatch"} group_key=isovaleraldehyde||dimension=Environmental > media=Air > strata=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'590-86-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-afd3a89e7a65c37c: {'590-86-3': 'exactMatch'}
273,708 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H10O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H10O"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '3-Methylbutanal'
280,082 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H10O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H10O"],"… rdkit_post_consensus from 'CC(C)CC=O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
287,447 strip_catalogue_altlabels altLabel [{"@value":"3-methylbutyraldehyde","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… [{"@value":"3-methylbutyraldehyde","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… Removed 1 catalogue altLabel value(s): 'NSC 404119' (registry code)
321,131 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/41409491-0176-… associations resolved on the elementary layer
387,982 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H10O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H10O"],"… typed the way the ontology types it
394,551 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1812399309960000/994 prefLabel ef:agent/bootstrap_labels ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v0 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v1
ef:activity/change/20260820T1812399309960000/995 name ef:agent/bootstrap_labels ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v1 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v2
ef:activity/change/20260820T1812399309960000/996 synonyms ef:agent/bootstrap_labels ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v2 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v3
ef:activity/change/20260820T1812399309960000/80250 context ef:agent/default_context_mapping ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v3 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v4
ef:activity/change/20260820T1812399309960000/80251 context_iri ef:agent/default_context_mapping ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v4 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v5
ef:activity/change/20260820T1812399309960000/213666 unit_iri ef:agent/unit_normalization ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v5 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v6
ef:activity/change/20260820T1812399309960000/221324 prefLabel ef:agent/normalize_name_case ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v6 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v7
ef:activity/change/20260820T1812399309960000/228124 properties ef:agent/enrich_references ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v7 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v8
ef:activity/change/20260820T1812399309960000/228125 skos_definition ef:agent/enrich_references ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v8 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v9
ef:activity/change/20260820T1812399309960000/228126 references ef:agent/enrich_references ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v9 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v10
ef:activity/change/20260820T1812399309960000/248585 properties ef:agent/rdkit_pre_consensus ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v10 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v11
ef:activity/change/20260820T1812399309960000/254502 altLabel ef:agent/chebi_altlabels ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v11 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v12
ef:activity/change/20260820T1812399309960000/268221 prefLabel ef:agent/consensus_match ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v12 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v13
ef:activity/change/20260820T1812399309960000/268222 altLabel ef:agent/consensus_match ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v13 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v14
ef:activity/change/20260820T1812399309960000/268223 altLabel ef:agent/consensus_match ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v14 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v15
ef:activity/change/20260820T1812399309960000/268224 cas_match_labels ef:agent/consensus_match ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v15 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v16
ef:activity/change/20260820T1812399309960000/273708 properties ef:agent/opsin_iupac ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v16 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v17
ef:activity/change/20260820T1812399309960000/280082 properties ef:agent/rdkit_post_consensus ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v17 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v18
ef:activity/change/20260820T1812399309960000/287447 altLabel ef:agent/strip_catalogue_altlabels ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v18 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v19
ef:activity/change/20260820T1812399309960000/321131 concept_associations ef:agent/carry_associations_onto_flows ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v19 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v20
ef:activity/change/20260820T1812399309960000/387982 properties ef:agent/normalise_property_values ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v20 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v21
ef:activity/change/20260820T1812399309960000/394551 types ef:agent/link_flows_to_their_substance ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v21 ef:flow/41409491-0176-4034-a1dc-87d6db0c0946/v22

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