Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=zincsulfate||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7733-02-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-c35d228824de4703: {'7733-02-0': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7733-02-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_35176']; candidate_pubchem_cids=[24424, 62639, 10313263, 23001851]; selected_pubchem_cids=[24424]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
14,668 bootstrap_labels prefLabel [{"@value":"zinc sulfate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… Bootstrapped prefLabel from legacy name field
14,669 bootstrap_labels name zinc sulfate Purged legacy name field to enforce prefLabel usage
14,670 bootstrap_labels synonyms ["inorganic","zincsulphate","zincsulphate(anhydrous)","zincsulphate(hydrous)(mono-,hexa-andheptahydrate)","sulfatodezin… [] Removed legacy synonyms field in favor of structured labels
80,392 default_context_mapping context {"dimension":"Environmental","media":"Air","indoor":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
80,393 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
218,182 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,486 normalize_name_case prefLabel [{"@value":"zinc sulfate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… [{"@value":"Zinc Sulfate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
241,063 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O4S.Zn","O… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
241,064 enrich_references skos_definition [{"@value":"A metal sulfate compound having zinc(2+) as the counterion.","@language":"en","provenance":{"prov:wasGenera… Merged ChEBI/PubChem definitions into skos:definition
241,065 enrich_references references [] [{"@id":"gmelin:18165","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… Added references with provenance; cas_numbers=['7733-02-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_35176']; candidate_pubchem_cids=[24424, 62639, 10313263, 23001851]; selected_pubchem_cids=[24424]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,319 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O4S.Zn","O… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O4S.Zn","O… rdkit_pre_consensus from 'O=S(=O)([O-])[O-].[Zn+2]'; added: monoisotopic_mass
256,350 chebi_altlabels altLabel [] [{"@value":"ZnSO4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
273,381 consensus_match altLabel [{"@value":"ZnSO4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… [{"@value":"ZnSO4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… group_key=zincsulfate||dimension=Environmental > media=Ground > geography=Agricultural; cas=7733-02-0; added Common Chemistry CAS names as altLabel: Biolectra Zink, Biosanzink, Bonazen, Bufopto Zinc Sulfate, Complexonat, Honny Fresh 10P, Kreatol, MeSH ID: D019287, Op-Thal-Zin, Optraex, Solvazinc, Solvezink, Sulfuric acid zinc salt, Sulfuric acid, zinc salt (1:1), Verazinc, White vitriol, Z-Span, Zinc sulfate (ZnSO<sub>4</sub>), Zinc vitriol, Zincaps, Zincate, Zinco, Zincomed, Zincteral; object_uuid=fo-c35d228824de4703
273,382 consensus_match cas_match_labels {"7733-02-0":"exactMatch"} group_key=zincsulfate||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7733-02-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-c35d228824de4703: {'7733-02-0': 'exactMatch'}
277,529 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O4S.Zn","O… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O4S.Zn","O… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Zinc Sulfate'
284,218 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O4S.Zn","O… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O4S.Zn","O… rdkit_post_consensus from 'O=S(=O)([O-])[O-].[Zn+2]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,791 dedupe_altlabels altLabel [{"@value":"ZnSO4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… [{"@value":"ZnSO4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… Deduplicated altLabel values and removed entries matching prefLabel
321,229 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/417cf6b1-13ec-… associations resolved on the elementary layer
391,886 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O4S.Zn","O… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O4S.Zn","O… typed the way the ontology types it
400,106 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalSalt"] the substance's answer, copied onto its flow
400,107 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_33286","rdfs:label":"agrochemical","http://www.w3.org/2004/02/skos/core#d… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1416470405690000/14668 prefLabel ef:agent/bootstrap_labels ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v0 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v1
ef:activity/change/20260820T1416470405690000/14669 name ef:agent/bootstrap_labels ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v1 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v2
ef:activity/change/20260820T1416470405690000/14670 synonyms ef:agent/bootstrap_labels ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v2 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v3
ef:activity/change/20260820T1416470405690000/80392 context ef:agent/default_context_mapping ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v3 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v4
ef:activity/change/20260820T1416470405690000/80393 context_iri ef:agent/default_context_mapping ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v4 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v5
ef:activity/change/20260820T1416470405690000/218182 unit_iri ef:agent/unit_normalization ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v5 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v6
ef:activity/change/20260820T1416470405690000/224486 prefLabel ef:agent/normalize_name_case ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v6 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v7
ef:activity/change/20260820T1416470405690000/241063 properties ef:agent/enrich_references ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v7 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v8
ef:activity/change/20260820T1416470405690000/241064 skos_definition ef:agent/enrich_references ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v8 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v9
ef:activity/change/20260820T1416470405690000/241065 references ef:agent/enrich_references ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v9 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v10
ef:activity/change/20260820T1416470405690000/252319 properties ef:agent/rdkit_pre_consensus ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v10 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v11
ef:activity/change/20260820T1416470405690000/256350 altLabel ef:agent/chebi_altlabels ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v11 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v12
ef:activity/change/20260820T1416470405690000/273381 altLabel ef:agent/consensus_match ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v12 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v13
ef:activity/change/20260820T1416470405690000/273382 cas_match_labels ef:agent/consensus_match ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v13 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v14
ef:activity/change/20260820T1416470405690000/277529 properties ef:agent/opsin_iupac ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v14 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v15
ef:activity/change/20260820T1416470405690000/284218 properties ef:agent/rdkit_post_consensus ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v15 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v16
ef:activity/change/20260820T1416470405690000/292791 altLabel ef:agent/dedupe_altlabels ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v16 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v17
ef:activity/change/20260820T1416470405690000/321229 concept_associations ef:agent/carry_associations_onto_flows ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v17 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v18
ef:activity/change/20260820T1416470405690000/391886 properties ef:agent/normalise_property_values ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v18 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v19
ef:activity/change/20260820T1416470405690000/400106 types ef:agent/link_flows_to_their_substance ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v19 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v20
ef:activity/change/20260820T1416470405690000/400107 roles ef:agent/link_flows_to_their_substance ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v20 ef:flow/417cf6b1-13ec-4098-9baf-71c75a3c0480/v21

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