Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'EKOS 1 (solvent)' (grade code), 'NSC 57858' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=tetrahydrofuran||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'109-99-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-cfe416b17456f27d: {'109-99-9': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['109-99-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_26911']; candidate_pubchem_cids=[8028, 2734600, 22180045]; selected_pubchem_cids=[8028]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
13,757 bootstrap_labels prefLabel [{"@value":"tetrahydrofuran","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… Bootstrapped prefLabel from legacy name field
13,758 bootstrap_labels name tetrahydrofuran Purged legacy name field to enforce prefLabel usage
13,759 bootstrap_labels synonyms ["1,4-Epoxybutane","300196X","300201X","AB1003943","AC1L1Q3L","AC1Q1I4B","AKOS000119982","Agrisynth THF","Butane .alpha… [] Removed legacy synonyms field in favor of structured labels
82,772 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
82,773 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
217,884 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,280 normalize_name_case prefLabel [{"@value":"tetrahydrofuran","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… [{"@value":"Tetrahydrofuran","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
240,211 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H8O"],"a… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
240,212 enrich_references skos_definition [{"@value":"A cyclic ether that is butane in which one hydrogen from each methyl group is substituted by an oxygen.","@… Merged ChEBI/PubChem definitions into skos:definition
240,213 enrich_references references [] [{"@id":"gmelin:1767","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… Added references with provenance; cas_numbers=['109-99-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_26911']; candidate_pubchem_cids=[8028, 2734600, 22180045]; selected_pubchem_cids=[8028]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,067 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H8O"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H8O"],"a… rdkit_pre_consensus from 'C1CCOC1'; added: monoisotopic_mass
256,241 chebi_altlabels altLabel [] [{"@value":"1,4-epoxybutane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
272,441 consensus_match altLabel [{"@value":"1,4-epoxybutane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… [{"@value":"1,4-epoxybutane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… group_key=tetrahydrofuran||dimension=Environmental > media=Ground > geography=Non-agricultural; cas=109-99-9; added Common Chemistry CAS names as altLabel: 2,3,4,5-Tetrahydrofuran, Butane α,δ-oxide, Butane, 1,4-epoxy-, Cyclotetramethylene oxide, EKOS 1 (solvent), Furan, tetrahydro-, NSC 57858, Oxacyclopentane, T 103262; object_uuid=fo-cfe416b17456f27d
272,442 consensus_match cas_match_labels {"109-99-9":"exactMatch"} group_key=tetrahydrofuran||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'109-99-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-cfe416b17456f27d: {'109-99-9': 'exactMatch'}
277,265 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H8O"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H8O"],"a… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Tetrahydrofuran'
283,932 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H8O"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H8O"],"a… rdkit_post_consensus from 'C1CCOC1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
290,080 strip_catalogue_altlabels altLabel [{"@value":"1,4-epoxybutane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… [{"@value":"1,4-epoxybutane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… Removed 2 catalogue altLabel value(s): 'EKOS 1 (solvent)' (grade code), 'NSC 57858' (registry code)
322,400 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/45ae99f2-ac40-… associations resolved on the elementary layer
391,613 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H8O"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H8O"],"a… typed the way the ontology types it
399,725 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1302361922970000/13757 prefLabel ef:agent/bootstrap_labels ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v0 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v1
ef:activity/change/20260821T1302361922970000/13758 name ef:agent/bootstrap_labels ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v1 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v2
ef:activity/change/20260821T1302361922970000/13759 synonyms ef:agent/bootstrap_labels ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v2 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v3
ef:activity/change/20260821T1302361922970000/82772 context ef:agent/default_context_mapping ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v3 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v4
ef:activity/change/20260821T1302361922970000/82773 context_iri ef:agent/default_context_mapping ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v4 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v5
ef:activity/change/20260821T1302361922970000/217884 unit_iri ef:agent/unit_normalization ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v5 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v6
ef:activity/change/20260821T1302361922970000/224280 prefLabel ef:agent/normalize_name_case ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v6 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v7
ef:activity/change/20260821T1302361922970000/240211 properties ef:agent/enrich_references ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v7 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v8
ef:activity/change/20260821T1302361922970000/240212 skos_definition ef:agent/enrich_references ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v8 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v9
ef:activity/change/20260821T1302361922970000/240213 references ef:agent/enrich_references ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v9 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v10
ef:activity/change/20260821T1302361922970000/252067 properties ef:agent/rdkit_pre_consensus ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v10 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v11
ef:activity/change/20260821T1302361922970000/256241 altLabel ef:agent/chebi_altlabels ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v11 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v12
ef:activity/change/20260821T1302361922970000/272441 altLabel ef:agent/consensus_match ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v12 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v13
ef:activity/change/20260821T1302361922970000/272442 cas_match_labels ef:agent/consensus_match ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v13 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v14
ef:activity/change/20260821T1302361922970000/277265 properties ef:agent/opsin_iupac ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v14 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v15
ef:activity/change/20260821T1302361922970000/283932 properties ef:agent/rdkit_post_consensus ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v15 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v16
ef:activity/change/20260821T1302361922970000/290080 altLabel ef:agent/strip_catalogue_altlabels ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v16 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v17
ef:activity/change/20260821T1302361922970000/322400 concept_associations ef:agent/carry_associations_onto_flows ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v17 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v18
ef:activity/change/20260821T1302361922970000/391613 properties ef:agent/normalise_property_values ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v18 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v19
ef:activity/change/20260821T1302361922970000/399725 types ef:agent/link_flows_to_their_substance ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v19 ef:flow/45ae99f2-ac40-4a73-8293-9029ae668120/v20

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