Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=d-α-methylbenzylamine||dimension=Environmental > media=Ground > geography=Unknown; group_sources=['chebi', 'ec_inventory']; cas_sources={'3886-69-9': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-0e2c4632b797e6b2: {'3886-69-9': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['3886-69-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_35322']; candidate_pubchem_cids=[7408, 75818, 643189, 3382465, 56924128]; selected_pubchem_cids=[643189]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
5,746 bootstrap_labels prefLabel [{"@value":"d-α-methylbenzylamine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… Bootstrapped prefLabel from legacy name field
5,747 bootstrap_labels name d-α-methylbenzylamine Purged legacy name field to enforce prefLabel usage
5,748 bootstrap_labels synonyms ["organic","d-î±-methylbenzylamine"] [] Removed legacy synonyms field in favor of structured labels
83,520 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Ocean"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
83,521 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-ocea Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
215,258 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,422 normalize_name_case prefLabel [{"@value":"d-α-methylbenzylamine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… [{"@value":"D-α-methylbenzylamine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
232,710 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
232,711 enrich_references skos_definition [{"@value":"The (R)-enantiomer of 1-phenylethanamine.","@language":"en","provenance":{"prov:wasGeneratedBy":"enrich_ref… Merged ChEBI/PubChem definitions into skos:definition
232,712 enrich_references references [] [{"@id":"gmelin:2894","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… Added references with provenance; cas_numbers=['3886-69-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_35322']; candidate_pubchem_cids=[7408, 75818, 643189, 3382465, 56924128]; selected_pubchem_cids=[643189]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,908 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N"],"… rdkit_pre_consensus from 'CC(C1=CC=CC=C1)N'; added: inchi2d_string, monoisotopic_mass
255,103 chebi_altlabels altLabel [] [{"@value":"(1R)-1-phenylethanamine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
265,519 consensus_match altLabel [{"@value":"(1R)-1-phenylethanamine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… [{"@value":"(1R)-1-phenylethanamine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… group_key=d-α-methylbenzylamine||dimension=Environmental > media=Ground > geography=Unknown; cas=3886-69-9; added Common Chemistry CAS names as altLabel: (+)-(<em>R</em>)-1-Phenethylamine, (+)-(<em>R</em>)-1-Phenylethylamine, (+)-(<em>R</em>)-α-Methylbenzylamine, (+)-(<em>R</em>)-α-Phenylethylamine, (+)-1-Amino-1-phenylethane, (+)-1-Phenethylamine, (+)-1-Phenylethan-1-amine, (+)-1-Phenylethylamine, (+)-Phenylethylamine, (+)-[(1<em>R</em>)-1-Phenylethyl]amine, (+)-α-Methylbenzenemethanamine, (+)-α-Methylbenzylamine, (+)-α-Phenethylamine, (+)-α-Phenylethylamine, (1<em>R</em>)-1-Phenyl-1-ethanamine, (1<em>R</em>)-1-Phenylethylamine, (1<em>R</em>)-Phenylethylamine, (1R)-1-Phenylethan-1-amine, (<em>R</em>)-(+)-1-Methylbenzylamine, (<em>R</em>)-(+)-1-Phenethylamine, (<em>R</em>)-(+)-1-Phenylethanamine, (<em>R</em>)-(+)-1-Phenylethylamine, (<em>R</em>)-(+)-Alpha-methylbenzylamine, (<em>R</em>)-(+)-Phenethylamine, (<em>R</em>)-(+)-α-Methylbenzylamine, (<em>R</em>)-(+)-α-Phenethylamine, (<em>R</em>)-(+)-α-Phenylethylamine, (<em>R</em>)-1-Amino-1-phenylethane, (<em>R</em>)-1-Aminoethylbenzene, (<em>R</em>)-1-Phenethylamine, (<em>R</em>)-1-Phenyl-1-ethanamine, (<em>R</em>)-1-Phenylethanamine, (<em>R</em>)-1-Phenylethylamine, (<em>R</em>)-Alpha-methylbenzylamine, (<em>R</em>)-Methylbenzylamine, (<em>R</em>)-Phenethylamine, (<em>R</em>)-Phenylethylamine, (<em>R</em>)-α-Aminoethylbenzene, (<em>R</em>)-α-Methylbenzenemethanamine, (<em>R</em>)-α-Methylbenzylamine, (<em>R</em>)-α-Phenethylamine, (<em>R</em>)-α-Phenylethylamine, (α<em>R</em>)-α-Methylbenzenemethanamine, <em>R</em>-(+)-Methylbenzylamine, <em>R</em>-(+)-Phenylethylamine, <em>d</em>-1-Phenylethylamine, <span class="text-smallcaps">D</span>-(+)-1-Phenylethylamine, <span class="text-smallcaps">D</span>-(+)-α-Methylbenzylamine, <span class="text-smallcaps">D</span>-(+)-α-Phenylethylamine, <span class="text-smallcaps">D</span>-Phenethylamine, <span class="text-smallcaps">D</span>-α-Phenethylamine, Benzenemethanamine, α-methyl-, (<em>R</em>)-, Benzenemethanamine, α-methyl-, (α<em>R</em>)-, Benzylamine, α-methyl-, (<em>R</em>)-(+)-, Benzylamine, α-methyl-, <em>d</em>-; object_uuid=fo-0e2c4632b797e6b2
265,520 consensus_match cas_match_labels {"3886-69-9":"exactMatch"} group_key=d-α-methylbenzylamine||dimension=Environmental > media=Ground > geography=Unknown; group_sources=['chebi', 'ec_inventory']; cas_sources={'3886-69-9': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-0e2c4632b797e6b2: {'3886-69-9': 'exactMatch'}
275,044 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(1R)-1-phenylethanamine'
281,535 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N"],"… rdkit_post_consensus from 'C[C@@H](N)c1ccccc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,286 dedupe_altlabels altLabel [{"@value":"(1R)-1-phenylethanamine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… [{"@value":"(1R)-1-phenylethanamine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… Deduplicated altLabel values and removed entries matching prefLabel
322,774 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/47039223-7319-… associations resolved on the elementary layer
389,352 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N"],"… typed the way the ontology types it
396,460 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
396,461 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N"],"… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/5746 prefLabel ef:agent/bootstrap_labels ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v0 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v1
ef:activity/change/20260821T1554374006150000/5747 name ef:agent/bootstrap_labels ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v1 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v2
ef:activity/change/20260821T1554374006150000/5748 synonyms ef:agent/bootstrap_labels ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v2 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v3
ef:activity/change/20260821T1554374006150000/83520 context ef:agent/default_context_mapping ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v3 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v4
ef:activity/change/20260821T1554374006150000/83521 context_iri ef:agent/default_context_mapping ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v4 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v5
ef:activity/change/20260821T1554374006150000/215258 unit_iri ef:agent/unit_normalization ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v5 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v6
ef:activity/change/20260821T1554374006150000/222422 prefLabel ef:agent/normalize_name_case ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v6 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v7
ef:activity/change/20260821T1554374006150000/232710 properties ef:agent/enrich_references ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v7 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v8
ef:activity/change/20260821T1554374006150000/232711 skos_definition ef:agent/enrich_references ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v8 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v9
ef:activity/change/20260821T1554374006150000/232712 references ef:agent/enrich_references ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v9 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v10
ef:activity/change/20260821T1554374006150000/249908 properties ef:agent/rdkit_pre_consensus ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v10 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v11
ef:activity/change/20260821T1554374006150000/255103 altLabel ef:agent/chebi_altlabels ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v11 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v12
ef:activity/change/20260821T1554374006150000/265519 altLabel ef:agent/consensus_match ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v12 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v13
ef:activity/change/20260821T1554374006150000/265520 cas_match_labels ef:agent/consensus_match ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v13 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v14
ef:activity/change/20260821T1554374006150000/275044 properties ef:agent/opsin_iupac ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v14 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v15
ef:activity/change/20260821T1554374006150000/281535 properties ef:agent/rdkit_post_consensus ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v15 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v16
ef:activity/change/20260821T1554374006150000/292286 altLabel ef:agent/dedupe_altlabels ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v16 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v17
ef:activity/change/20260821T1554374006150000/322774 concept_associations ef:agent/carry_associations_onto_flows ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v17 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v18
ef:activity/change/20260821T1554374006150000/389352 properties ef:agent/normalise_property_values ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v18 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v19
ef:activity/change/20260821T1554374006150000/396460 types ef:agent/link_flows_to_their_substance ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v19 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v20
ef:activity/change/20260821T1554374006150000/396461 properties ef:agent/link_flows_to_their_substance ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v20 ef:flow/47039223-7319-4a1c-8332-e2c009a7ced4/v21

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