Consensus flow list

By field

16 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'HOE 21079' (grade code)
cas_match_labels 1 consensus_match group_key=2-[4-(2,4-dichlorophenoxy)phenoxy]propanoicacid||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'pubchem']; cas_sources={'40843-25-2': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5eca9cb230563e00: {'40843-25-2': 'exactMatch'}
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
dcterms_is_replaced_by 1 pipeline.deduplication duplicate of 29283fdd-8539-4735-b206-0f456e2ad8f2
is_replaced_by_uuid 1 pipeline.deduplication duplicate of 29283fdd-8539-4735-b206-0f456e2ad8f2
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
owl_deprecated 1 pipeline.deduplication duplicate of 29283fdd-8539-4735-b206-0f456e2ad8f2
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['40843-25-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_81909']; candidate_pubchem_cids=[38687]; selected_pubchem_cids=[38687]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
22,259 bootstrap_labels prefLabel [{"@value":"Diclofop","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Bootstrapped prefLabel from legacy name field
22,260 bootstrap_labels name Diclofop Purged legacy name field to enforce prefLabel usage
22,261 bootstrap_labels synonyms ["HOE-021079","2-(4-(2,4-dichlorophenoxy)phenoxy)propanoic acid","Diclofop acid","Diclofop"] [] Removed legacy synonyms field in favor of structured labels
64,502 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
64,503 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
218,766 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
242,718 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H12Cl2O… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
242,719 enrich_references skos_definition [{"@value":"A racemate composed of equimolar amounts of (R)- and (S)-diclofop. It is a metabolite of declofop-methyl an… Merged ChEBI/PubChem definitions into skos:definition
242,720 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J20.671G","provenance":{"prov:wasGeneratedBy":"enrich_referenc… Added references with provenance; cas_numbers=['40843-25-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_81909']; candidate_pubchem_cids=[38687]; selected_pubchem_cids=[38687]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,801 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H12Cl2O… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H12Cl2O… rdkit_pre_consensus from 'CC(C(=O)O)OC1=CC=C(C=C1)OC2=C(C=C(C=C2)Cl)Cl'; added: molecular_mass, monoisotopic_mass
256,573 chebi_altlabels altLabel [] [{"@value":"(+-)-2-[4-(2,4-dichlorophenoxy)phenoxy]propanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"ch… Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
260,472 consensus_match altLabel [{"@value":"(+-)-2-[4-(2,4-dichlorophenoxy)phenoxy]propanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"ch… [{"@value":"(+-)-2-[4-(2,4-dichlorophenoxy)phenoxy]propanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"ch… group_key=2-[4-(2,4-dichlorophenoxy)phenoxy]propanoicacid||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=40843-25-2; added Common Chemistry CAS names as altLabel: (±)-Diclofop, 2-[4-(2,4-Dichlorophenoxy)phenoxy]propanoic acid, 2-[4-(2′,4′-Dichlorophenoxy)phenoxy]propionic acid, HOE 21079, Propanoic acid, 2-[4-(2,4-dichlorophenoxy)phenoxy]-; object_uuid=fo-5eca9cb230563e00
260,473 consensus_match cas_match_labels {"40843-25-2":"exactMatch"} group_key=2-[4-(2,4-dichlorophenoxy)phenoxy]propanoicacid||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'pubchem']; cas_sources={'40843-25-2': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5eca9cb230563e00: {'40843-25-2': 'exactMatch'}
278,016 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H12Cl2O… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H12Cl2O… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(+-)-2-[4-(2,4-dichlorophenoxy)phenoxy]propanoic acid'
284,744 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H12Cl2O… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H12Cl2O… rdkit_post_consensus from 'CC(Oc1ccc(Oc2ccc(Cl)cc2Cl)cc1)C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,601 strip_catalogue_altlabels altLabel [{"@value":"(+-)-2-[4-(2,4-dichlorophenoxy)phenoxy]propanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"ch… [{"@value":"(+-)-2-[4-(2,4-dichlorophenoxy)phenoxy]propanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"ch… Removed 1 catalogue altLabel value(s): 'HOE 21079' (grade code)
293,620 pipeline.deduplication owl_deprecated yes duplicate of 29283fdd-8539-4735-b206-0f456e2ad8f2
293,621 pipeline.deduplication dcterms_is_replaced_by urn:uuid:29283fdd-8539-4735-b206-0f456e2ad8f2 duplicate of 29283fdd-8539-4735-b206-0f456e2ad8f2
293,622 pipeline.deduplication is_replaced_by_uuid 29283fdd-8539-4735-b206-0f456e2ad8f2 duplicate of 29283fdd-8539-4735-b206-0f456e2ad8f2
392,375 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H12Cl2O… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H12Cl2O… typed the way the ontology types it
400,803 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
400,804 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24527","rdfs:label":"herbicide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/22259 prefLabel ef:agent/bootstrap_labels ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v0 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v1
ef:activity/change/20260820T0738569779880000/22260 name ef:agent/bootstrap_labels ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v1 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v2
ef:activity/change/20260820T0738569779880000/22261 synonyms ef:agent/bootstrap_labels ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v2 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v3
ef:activity/change/20260820T0738569779880000/64502 context ef:agent/default_context_mapping ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v3 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v4
ef:activity/change/20260820T0738569779880000/64503 context_iri ef:agent/default_context_mapping ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v4 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v5
ef:activity/change/20260820T0738569779880000/218766 unit_iri ef:agent/unit_normalization ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v5 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v6
ef:activity/change/20260820T0738569779880000/242718 properties ef:agent/enrich_references ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v6 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v7
ef:activity/change/20260820T0738569779880000/242719 skos_definition ef:agent/enrich_references ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v7 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v8
ef:activity/change/20260820T0738569779880000/242720 references ef:agent/enrich_references ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v8 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v9
ef:activity/change/20260820T0738569779880000/252801 properties ef:agent/rdkit_pre_consensus ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v9 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v10
ef:activity/change/20260820T0738569779880000/256573 altLabel ef:agent/chebi_altlabels ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v10 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v11
ef:activity/change/20260820T0738569779880000/260472 altLabel ef:agent/consensus_match ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v11 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v12
ef:activity/change/20260820T0738569779880000/260473 cas_match_labels ef:agent/consensus_match ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v12 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v13
ef:activity/change/20260820T0738569779880000/278016 properties ef:agent/opsin_iupac ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v13 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v14
ef:activity/change/20260820T0738569779880000/284744 properties ef:agent/rdkit_post_consensus ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v14 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v15
ef:activity/change/20260820T0738569779880000/291601 altLabel ef:agent/strip_catalogue_altlabels ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v15 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v16
ef:activity/change/20260820T0738569779880000/293620 owl_deprecated ef:agent/pipeline.deduplication ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v16 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v17
ef:activity/change/20260820T0738569779880000/293621 dcterms_is_replaced_by ef:agent/pipeline.deduplication ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v17 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v18
ef:activity/change/20260820T0738569779880000/293622 is_replaced_by_uuid ef:agent/pipeline.deduplication ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v18 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v19
ef:activity/change/20260820T0738569779880000/392375 properties ef:agent/normalise_property_values ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v19 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v20
ef:activity/change/20260820T0738569779880000/400803 types ef:agent/link_flows_to_their_substance ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v20 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v21
ef:activity/change/20260820T0738569779880000/400804 roles ef:agent/link_flows_to_their_substance ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v21 ef:flow/47cf701e-08b6-4a0a-993d-e8e80b9bcbe1/v22

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